Pseudomonas toyotomiensis: JWV26_20645
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Entry
JWV26_20645 CDS
T07285
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pty
Pseudomonas toyotomiensis
Pathway
pty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JWV26_20645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pty03021
]
JWV26_20645
Transcription machinery [BR:
pty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JWV26_20645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
Rv2175c_wHTH
MerR
HTH_24
HTH_29
HTH_IclR
Sigma70_r3
HTH_31
HTH_17
HTH_AsnC-type
TnsD
HTH_5
HTH_3
HTH_10
GerE
MerR_1
HTH_28
HTH_11
FaeA
HTH_38
Fe_dep_repress
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
QSL92132
LinkDB
All DBs
Position
complement(4464157..4464681)
Genome browser
AA seq
174 aa
AA seq
DB search
MRVSVQDFSNQQLVGVLYRDHRDWLFGWLRKSLNCAQRAEDLSQDTFVRLLGRADLHSPR
EPRALLTTIAKGLLVDQFRRHALERAYLEELALAPEAVQPSPEEQALALEQLAEIDRLLG
QLSSKARAAFLYNRLDGLGHAEIAERLGVSPSRVRQYLAQGLRQCYIALYGAPQ
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtgtcggttcaggatttcagcaatcagcagctggtcggtgtgctttatcgcgat
caccgtgactggctgttcggctggctgcgcaaaagcctgaactgcgcgcagcgcgccgaa
gacctgagccaggacaccttcgtccgcctgctcggtcgcgccgacctgcacagtccgcgc
gagcccagagccctgctcaccaccatcgccaaggggctgttggtcgaccagtttcgccgc
catgcgctggagcgtgcctatctggaagaactcgcgctggctcctgaagccgtgcaaccc
agcccggaagaacaggccctggccctggagcaactggccgagatcgatcgcctgctcggc
cagctgtcgagcaaggcacgcgcagcgttcctctataaccgtctggatggcctcggtcat
gccgagatcgccgagcgccttggtgtgtccccgtcacgcgtgcgtcaatacctcgcccag
ggcctgcgccagtgctacatcgcgctgtacggagcgccgcaatga
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