Pseudomonas tensinigenes: HU718_000415
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Entry
HU718_000415 CDS
T07620
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
ptz
Pseudomonas tensinigenes
Pathway
ptz02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU718_000415 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptz02044
]
HU718_000415 (tssC)
Secretion system [BR:
ptz02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU718_000415 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
QXI06189
LinkDB
All DBs
Position
complement(83723..85198)
Genome browser
AA seq
491 aa
AA seq
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MSTSAAQEKSAGNGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVK
KAMVDRMIAEIDAKLSRQMDEILHHPDFQALESSWRGLQLLVDRTNFRENIKIEILNVSK
EDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVASV
SCMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRTSEDSRYVGLTVP
RFLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagcgcagcacaagagaagagcgccggcaacggcgagtacagcattctcgac
agcatcatcgccgaaacccgtctgactccggacgacgaagcctacgacatcgccaagcgc
ggtgtgtcggcgttcatcgaagaactgctcaagccgcagaacaacggtgagccggtcaaa
aaggccatggttgaccgcatgatcgccgagatcgatgccaagctcagccgtcagatggac
gaaatcctgcaccacccggacttccaggctctggaatcgtcgtggcgtggtctgcagttg
ctggtcgaccgcaccaacttccgcgaaaacatcaagatcgaaatcctcaacgtttcgaaa
gaagacctgctggacgatttcgaagattcgccggaagtcatgcagtcgggcctgtacaag
cacatctacaccgctgaatacggccagttcggtggtcagcctgtgggcgcgatcatcgct
aactactacatgtcgccaagctcgccagacgtcaagctgatgcagtacgtggccagcgtt
tcgtgcatgtcccacgcgccgttcatcgctgctgccggcccgaaattcttcggtctggaa
agcttcaccggcctgccggatctgaaagatctgaaagaccacttcgaaggcccgcaattc
gccaaatggcagagcttccgtacttcggaagactcccgctacgttggcctgactgtgccg
cgtttcctgctgcgtaacccgtacgatccggaagaaaacccggtcaaatcgttcgtgtac
aaggaaaccgttgccaacagccacgagcactacctgtggggcaacaccgcttacgcgttc
ggcaccaagctgaccgacagcttcgccaaattccgctggtgcccgaacatcatcggcccg
cagagcggtggcgcggttgaagacctgccgttgcaccatttcgaaagcatgggcgaaatc
gaaaccaagattcctactgaagttctggtttccgaccgtcgtgaatacgaactggccgag
gaaggcttcatctccctgaccatgcgtaaaggctccgataacgcggcgttcttctccgcg
agttcggtgcagaagccgaagttcttcggcatcagcgcagaaggcaaggccgcagagctg
aactacaagctcggcacccaactgccgtacatgatgatcgtcaaccgcctggctcactac
ttgaaagtgctgcagcgcgagcaactcggttcgtggaaagaacgtaccgacctcgagctg
gaactgaacaagtggattcgtcagtacgttgccgaccaggaaaacccgagcgccgaagtc
cgtggccgtcgtccgctgcgcgctgcgcaagtgatcgtcagcgacgttgaaggcgagccg
ggctggtaccgcgtgagcttgaacgtgcgtccgcacttcaagtacatgggtgccgatttc
accctgtcgctggttggcaagctggacaaagagtaa
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