KEGG   Pseudomonas tensinigenes: HU718_017650
Entry
HU718_017650      CDS       T07620                                 
Name
(GenBank) Hcp family type VI secretion system effector
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
ptz  Pseudomonas tensinigenes
Pathway
ptz02025  Biofilm formation - Pseudomonas aeruginosa
ptz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ptz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HU718_017650
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    HU718_017650
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ptz02044]
    HU718_017650
Secretion system [BR:ptz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HU718_017650
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: QXI03857
LinkDB
Position
complement(3981510..3982025)
AA seq 171 aa
MATPAYMSVTGEKQGLITAGAFTADSVGNTYQEGHEDQVMVQAFTHDVIIPRDPQSGQPT
GQRVHKPVVITKVYDKASPLLQAALTSGERMSEIVIQWYRTSAQGTQEHYYTTKLEDAII
VAINNKMHNCQDPGNAHFTHLEEVQFTYRKITWTHEVSGTSGSDDWRAPVV
NT seq 516 nt   +upstreamnt  +downstreamnt
atggcaacaccagcgtacatgtcggttaccggcgaaaaacaaggtctgatcactgccggc
gcattcaccgccgactccgttggcaacacctaccaggaaggccacgaagaccaagtcatg
gttcaggctttcacccacgacgtgatcatcccgcgtgacccgcaatccggtcagccaacc
ggtcagcgcgtgcacaagccagtggtcatcaccaaggtctacgacaaggcttcgccgctg
ctgcaagcagcgctgacctccggcgagcgcatgagcgaaatcgttatccagtggtaccgc
acttcggcgcaaggcacccaagagcactactacaccaccaaactggaagacgcgatcatc
gtcgccatcaacaacaaaatgcacaactgccaggatccaggcaacgcgcacttcacccac
ctggaagaagtgcagttcacctaccgcaaaatcacctggacccacgaagtctccggtact
tcgggttccgatgactggcgtgctccagtcgtttaa

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