Pseudomonas tensinigenes: HU718_020805
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Entry
HU718_020805 CDS
T07620
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ptz
Pseudomonas tensinigenes
Brite
KEGG Orthology (KO) [BR:
ptz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptz03032
]
HU718_020805 (topA)
03400 DNA repair and recombination proteins [BR:
ptz03400
]
HU718_020805 (topA)
Enzymes [BR:
ptz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HU718_020805 (topA)
DNA replication proteins [BR:
ptz03032
]
Prokaryotic type
DNA Topoisomerases
HU718_020805 (topA)
DNA repair and recombination proteins [BR:
ptz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU718_020805 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QXI04469
LinkDB
All DBs
Position
complement(4720962..4723592)
Genome browser
AA seq
876 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAAGE
GPVLSPKEKARKQLVSRMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD
REGEAIAWHLREAIGGDDSRYKRVVFNEITKKAIQEAFSEPGELDIDRVNAQQARRFLDR
VVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFNPEEYWEVHADLGTTKGST
VRFEVAREKGEAFKPLNEAQAMAALEKLKSSSYSIVKREDKPTSSKPSAPFITSTLQQAA
SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADAVAMARTYIEDEFGKKYLPETPN
VYSSKEGAQEAHEAIRPSDANTTPSKLAGMERDAERLYELIWRQFLACQMLPAQYLSTTV
SVGAGDFELRAKGRILKFDGYTRVMPQIAKPGDDDVLPDMAQGDVMKLIKLDPSQHFTKP
PARYSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVTLHNRRFYSEKMGDIVTERLSES
FSNLMDYGFTAGMEENLDDVAQGERDWKSVLDEFYGDFKKKLEVAENPDSGMRANQPVMT
DIPCTTCGRPMQIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESLVL
RGKHRCPICSTAMDAYLLDEKRKLHICGNNPDCAGYEIEEGSYRIKGYEGPSLECDKCGS
EMQLKTGRFGKFFGCTNPECKNTRKLLKSGDAAPPKMDPVKMPELKCEKVNDTYILRDGA
SGLFLAASQFPKNRETRAPLVIEIVPHKDEIDPKYHFLCDAPKKDPDGLPAVIRYSRKTK
EQYVQTEVDGKPTGWKAYFDGGKWTVEDKRTKAKAE
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctggtcattgtggaatccccggctaaggccaagaccatcaacaagtat
ctgggtaaccaatacgtggtgaagtcgagtatcggccatatccgagacctgcccaccagc
ggttcggctagcgccagcaaagagccagccgccaagcgcggcaaggctgctgcgggcgaa
ggtccggtgctctcgccgaaagagaaagcgcgcaagcagctggtctcgcgtatgggtgtc
gatcccgatcatggctggaaagccaagtacgagatcctcccgggtaaagagaaggtcatc
gaagagctgcgccggctcgccaaagatgctgacaccatctatctcgcaaccgacttggat
cgcgagggggaagccattgcctggcacctgcgcgaagccatcggaggtgacgacagccgc
tacaagcgcgtggtgttcaacgaaatcaccaagaaggcgattcaggaagccttctcggaa
ccgggcgagctggacatcgatcgtgtcaacgcgcagcaggcgcgtcgtttcctcgaccgc
gttgtgggttacatggtctcgccgctgctgtgggcgaaaatcgctcgtggcctgtccgcc
ggtcgcgtgcaatcggttgccgtgaagctggtcgtggagcgtgagcgcgaaattcgtgcg
ttcaacccggaagagtactgggaagtgcacgccgatctcggcaccacgaaaggctcgacc
gtgcgtttcgaagtggctcgcgagaaaggcgaggccttcaagccgctcaacgaagcccag
gccatggctgcgctggagaagctcaagtcttccagctacagcatcgtcaaacgcgaagac
aagccgaccagcagcaagccttcggcgccgttcatcacgtcgaccctgcaacaggctgcg
agcaaccgtctgggcttcggcgtgaagaaaaccatgatgatggcccagcgtctgtacgaa
gccggctacatcacttatatgcgtaccgactcgaccaacctctcggctgatgccgtggcg
atggcgcgcacttatatcgaagacgagttcggcaagaagtacctgccggaaacgccaaac
gtctacagcagcaaagaaggcgcacaggaggctcacgaagcgatccgtccttccgacgcc
aacaccacgccgagcaagctcgcaggcatggagcgtgacgctgagcgcctctacgaattg
atctggcgccagttcctcgcttgccagatgctgccggcgcaatacctgtcgaccactgtc
agcgtcggcgctggcgacttcgagctgcgcgccaagggccgtatcctcaagttcgacggt
tacacccgcgtcatgccgcagattgccaaaccaggcgacgacgacgttctgcctgatatg
gctcagggcgacgtgatgaagctgatcaagcttgatccgtcgcagcacttcaccaagccg
ccggcgcgttactcggaagccagcctggttaaagaaatggaaaaacgtggcattggtcgt
ccctcgacttacgctgcgatcatttcgaccattcaggatcgcggttatgtgaccttgcac
aaccgtcgtttctactcggaaaagatgggcgacatcgtcaccgagcgtctgtcggaaagc
ttctccaacctcatggactacggcttcactgccggcatggaagagaacctcgatgacgtg
gcacagggtgagcgcgactggaaaagtgtgctggacgagttctacggcgatttcaaaaag
aaactcgaagtagccgaaaacccggacagcggcatgcgcgccaaccagccggtcatgacc
gatattccttgcaccacttgcggccgtccgatgcagattcgtactgcgtcgactggcgtg
ttcctcgggtgctcgggctacagcctgccgccgaaagaacgctgcaaggccaccgtcaac
ctggtgccgggcgacgagatcgctgcggacgacgaaggtgagtcggaatcgctggtgctg
cgtggcaagcatcgctgcccgatttgcagcacggcgatggacgcttatctgctcgacgag
aagcgcaagctgcacatctgcggtaacaacccggattgcgcaggctacgaaatcgaagag
ggcagctatcgcatcaaaggctacgaaggtccgagcctggaatgcgacaagtgcggcagc
gagatgcagctcaagactggccgtttcggcaagttcttcggttgcaccaaccctgagtgc
aagaacacccgcaaactgctgaaaagcggtgatgcagcgccaccgaagatggatccggtg
aagatgcctgagctgaaatgcgaaaaggtcaacgacacctacatcctccgtgatggcgcc
tctggtctgttcctggccgccagccagttcccgaaaaaccgtgagacccgtgctccgctg
gtgatcgagattgtgccgcacaaggacgaaatcgatccgaagtatcatttcctctgcgac
gcgccgaagaaggatcctgatggtctgccagcggttattcgctacagccgcaagaccaaa
gagcaatacgtgcagaccgaagtcgacggcaagcctaccggttggaaggcgtacttcgac
ggcggtaagtggacggttgaagacaagcgtacgaaggccaaagccgagtaa
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