Candidatus Pelagibacter ubique: SAR11_0273
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Entry
SAR11_0273 CDS
T00257
Symbol
stc
Name
(GenBank) transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pub
Candidatus Pelagibacter ubique
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pub03000
]
SAR11_0273 (stc)
Transcription factors [BR:
pub03000
]
Prokaryotic type
Helix-turn-helix
Other families
SAR11_0273 (stc)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
GAF
HTH_8
HTH_28
HTH_22
HTH_29
HTH_30
HTH_1
HTH_11
NUMOD1
HTH_23
iPGM_N
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AAZ21094
UniProt:
Q4FNZ5
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All DBs
Position
275137..276219
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AA seq
360 aa
AA seq
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MPNLTSVEKEFSNLTKKRGFLSSLIDKDIADSWKRCISTGLDPLKKPKRTILSSKELDEL
KEKNEYIRRLINPELELLYSQIAGTNFMVAYSDSTGSVMDTIYDKTCLKTDVGKIVIPGS
IWREEIGGTNGLGQVVTLNKDSIVSGKEHFFESHGKLSCFASPILNHEGKTIGIIDASTD
VHSREQHTLALVKLATKSIETKLFINQFKDELILSFHPRQEYLSTNSVGLLAINGDGFVV
GSNSNARIMLHGLAPLKNENFNNIFTTSFSSIANELLQNKILKISDHLGSSVFIIKSQNF
KKKISKETGIKTYACNNCKGSKFKEERCVLIKSAFIETGNISAASRKLGVSRTTIYKHLK
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatttaacatctgttgaaaaagaattctctaacctcactaagaaaagaggtttt
ttatcttctttgattgataaagatatagctgatagctggaagagatgtatttcaacagga
ttggatccgcttaaaaaaccaaagagaacgattctttcttctaaagagcttgatgagctt
aaagaaaaaaatgaatatattagaagactgataaaccctgagcttgaacttctatattca
caaatagctggaacaaactttatggtagcatattctgacagcactggctcagttatggat
actatttacgataaaacctgtcttaaaactgatgttggaaaaattgtaataccaggttca
atttggagagaagaaattggaggtactaatggattaggacaggttgtaactctcaataaa
gactccatagtttcaggtaaagagcatttttttgagtcacatggaaaattatcttgcttt
gcaagtccaatactaaatcatgaaggtaaaacaataggtataatagatgcttctactgat
gtgcattcaagagagcagcacacactagcgctagttaagcttgctacaaaaagcatcgaa
acaaaattatttataaatcaatttaaagatgaattaattttatctttccatccacgccaa
gaatatcttagtactaatagtgttggtttgcttgcaattaatggtgatggatttgttgtt
ggttctaattcaaacgcacgaataatgctacatggactagcaccattaaagaatgagaat
tttaataatatttttacaacttcattttcttcaatagcaaatgaacttttacaaaataaa
atcctaaaaatttctgatcatttaggttcgtctgtctttataataaaaagtcaaaatttt
aagaaaaaaatatccaaagaaacaggaataaaaacttatgcgtgcaataactgtaaaggt
tctaagtttaaggaagaaagatgtgttttaattaaatctgcatttatagaaactggaaat
attagtgcagcttccagaaaacttggtgtatcaagaaccacaatttacaaacatctaaaa
taa
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