Panthera uncia (snow leopard): 125925879
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Entry
125925879 CDS
T08832
Name
(RefSeq) pogo transposable element with KRAB domain
Organism
puc
Panthera uncia (snow leopard)
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Gene cluster
GFIT
Motif
Pfam:
DDE_1
BrkDBD
KRAB
HTH_Tnp_Tc5
Motif
Other DBs
NCBI-GeneID:
125925879
NCBI-ProteinID:
XP_049491091
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Position
F1:9378010..9393555
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AA seq
609 aa
AA seq
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MDSTAYTLNLTLKEEEEEEEIQSRELEDGPTDMQKVRICSEGGWVPALFDEVAIYFSDEE
WEVLTEQQKALYREVMRMNYETVLSLEFPFPKPDMITRLEGDEESQNSDEWQLQGGTLAE
NEETDVKPPDWAGPMSATPHFPQPQHLDGFGLRLPRDLTELPEWSEGYPFYMAMGFPGYD
LSADDIAGKFQFSRGMRRSYDAGFKLMVVEYAESTNNCQAAKQFGVLEKNVRDWRKVKPQ
LQNAHAMRRAFRGPKNGRFALVDQRVAEYVRYMQAKGDPITREAMQLKALEIAQEMNIPE
KGFKASLGWCRRMMRRYDLSLRHKVPVPQQLPEDLTEKLVTYQRSVLALRRAHDYQVAQM
GNADETPICLEVPSRVTVDNQGEKPVLVKTPGREKLKITAMLGVLADGRKLPPYIILRGT
YIPPGKFPSGMEIRCHRYGWMTEDLMQDWLEVVWRRRTGAAPKQRGMLILNGFRGHATDS
VKSSMESMNTDMVIIPGGLTSQLQVLDVVVYKPLNDSVRAQYSNWLLAGNLALSPTGNAK
KPPLGLFLEWVMVAWNSISSESIVQGFKKCHISSNLEDEDDVLWEIESELPGGGEGPREC
DTESAPEGN
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggattccacagcctacactctcaatttgaccctgaaagaagaagaagaggaagaagag
attcagagtcgggaactggaggatggccccacagatatgcagaaagtccggatctgctca
gaaggtggttgggtgccggccctattcgatgaggtggccatatatttttccgatgaggag
tgggaagttttgacggagcaacaaaaagccctctaccgggaagtcatgaggatgaattat
gaaactgtcctgtccctggaattcccattccctaagccagacatgatcactcggttggaa
ggtgacgaggagtctcagaattctgatgaatggcagctccaaggaggaaccttggcagaa
aatgaagagactgacgtcaagcccccggactgggcgggtccgatgagcgccaccccccac
tttcctcagccacagcacctggacggctttggcctccgcctgcctcgggacctcacggag
ctgcccgagtggagtgaggggtaccccttctacatggccatgggcttcccggggtacgac
ctctctgcggacgatattgccgggaagtttcagttcagcaggggcatgcggcgcagttac
gacgcggggttcaagctcatggtggtggaatatgctgagagcaccaacaactgccaggct
gccaagcagtttggagtgctggaaaagaacgttcgggactggcgcaaagtgaagccgcag
ctgcagaacgcccacgccatgcggcgggcgttccgcggccccaagaacgggcgctttgcc
ctggtggaccagcgcgtggccgagtacgtcaggtacatgcaggccaaaggggaccctatc
accagggaggccatgcagctgaaagccctcgagatcgcccaggaaatgaacattccggag
aaggggttcaaagccagcttgggttggtgtcgaagaatgatgcgaaggtatgacttgtcc
ctgcggcataaggtgccggtgccccagcagctgcccgaagacctgacggagaagctcgtc
acctaccagcggagcgtgctggccctgcgcagggcgcacgactaccaggtggcgcagatg
gggaacgccgacgagacgcccatttgtctagaggtgccctcgcgggtgaccgtggacaac
cagggcgagaagcccgtcttggtcaagacgccgggcagggagaagctgaagatcacggcg
atgctgggtgtcttggcagacgggaggaagctgcccccgtacatcatcttgaggggcacg
tacatcccccccgggaagttccccagcgggatggagatccgctgccaccggtacgggtgg
atgacggaggacttgatgcaggactggttggaagtggtgtggcgtcggaggaccggcgcg
gcgcccaagcagcgagggatgctgatcctgaacggcttccgcggccacgccacggattcc
gtgaagagctccatggagagcatgaacaccgacatggtcatcatccccggaggcctgacc
tcgcagctgcaggtgctggacgtggtggtctacaagccgctcaatgacagcgtccgggcc
cagtactctaactggctcctggccgggaacctggcgctgagccccaccgggaacgccaag
aagccgcccctgggcctcttcctggagtgggtcatggtcgcgtggaacagcatctccagc
gaatccatcgtccagggcttcaagaagtgccacatctccagcaatctggaagacgaagac
gacgtcctgtgggagatcgagagcgagctgccgggaggaggggagggacccagagaatgc
gataccgagagcgcgccagagggcaactga
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