Pseudomonas umsongensis: HGP31_17675
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Entry
HGP31_17675 CDS
T06842
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pum
Pseudomonas umsongensis
Pathway
pum02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HGP31_17675 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pum02044
]
HGP31_17675 (tssB)
Secretion system [BR:
pum02044
]
Type VI secretion system
Imp/Vas secretion system core components
HGP31_17675 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
QJC80055
LinkDB
All DBs
Position
complement(3943069..3943572)
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AA seq
167 aa
AA seq
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MASSSFQNEVPKARVNIKLDLHTGGAQKKVELPLKLMVMGDYSNGREQRPLSARSKVSIN
KNNFDSVLAEFTPVLKVAVENTLVDDAGDASVELKFQRMKDFEPEQVARQIPHLRALLAM
RNLLRDLKSNLLDNATFRHELERILKDDALSDELRAELATLVPEENR
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagcagctttcagaacgaagtgccaaaggcacgggtcaacataaaactcgac
ctgcataccggcggtgcgcagaaaaaagtcgaattaccgctgaagctgatggtcatgggt
gactacagcaatggcagggaacagcgccccttatcagcccgaagcaaggtttcaatcaac
aaaaacaacttcgatagcgtcttggcggagtttactccggtgttgaaagtggccgtggaa
aataccctggtcgatgacgctggcgacgcctcggtcgagctgaagttccagcgcatgaag
gacttcgagccggagcaggtggcgcggcaaatcccgcatctgcgcgcgcttttggccatg
cgcaacctcttgcgtgacctcaagtcgaatctgctggacaacgccacctttcgtcatgag
ctggaacgtatcctcaaggatgatgcgctcagcgacgagttgcgcgccgagttggccacg
ttggtaccggaagaaaatcgttaa
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