Pseudomonas viridiflava: CFBP1590__4018
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Entry
CFBP1590__4018 CDS
T06554
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pvd
Pseudomonas viridiflava
Brite
KEGG Orthology (KO) [BR:
pvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvd03016
]
CFBP1590__4018 (truD)
Enzymes [BR:
pvd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CFBP1590__4018 (truD)
Transfer RNA biogenesis [BR:
pvd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFBP1590__4018 (truD)
Prokaryotic type
CFBP1590__4018 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
E3_binding
Motif
Other DBs
NCBI-ProteinID:
SMS11604
UniProt:
A0A1Y6JP61
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All DBs
Position
I:complement(4463216..4464274)
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AA seq
352 aa
AA seq
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MTELELLGPTAWGKALGNAVLKATAEDFQVDEVLDIPLSGDGEHLWLWVEKRGLNTEEAA
RRLARAAGVQLRTVSYAGLKDRQALTRQWFSIQLPGKADPDLSAAQDETLQILKMSRHKR
KLQRGAHAANGFTLRLTQLTADKDALNQRLESIARLGIPNYFGAQRFGYQGGNLGEARDY
ASRQALPEQRAVRSRLLSTARSYLFNQVLAARVADGNWQHAQVGDLLAFTDSRSFFPAGV
EECSDPRLAILDLHPTGPQWGAGPSPALGKTAELENAIAAEHPALRDWLIRAGMEHERRI
LRLPIGRLTWHYPEPDILQLEFVLPPGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacttgaattgttgggcccgacggcttggggcaaggcactgggaaacgctgtt
ctcaaggcaaccgccgaagattttcaggtcgatgaagtgctcgatattccgctttcgggc
gatggcgagcatctatggctgtgggtcgagaaacgtggcctcaataccgaggaagccgcg
cgccgtctggcccgggctgccggtgttcaattgcgtacagtcagctatgccggtttgaaa
gaccgtcaggcgctcacccgtcaatggttcagtattcagttgcccggcaaggccgacccc
gatctgtccgccgcgcaggacgagacgctgcagatcctcaagatgagccgccacaagcgc
aaattgcagcgtggcgcgcacgcagccaatggtttcaccttgcgcctgactcaattgaca
gctgacaaggacgcgctgaatcagcggctcgagtcgatcgcccggctcgggattcccaac
tacttcggcgctcagcgcttcggctatcagggtggcaatctgggcgaggctcgcgactac
gcgtcccgtcaggcgctgcccgagcagcgcgcggtccgctcgcgtctactgtcaacggcc
cgcagctacctgttcaatcaggttctcgccgcacgcgttgccgatggcaactggcagcac
gctcaggtcggtgatctgctggcgttcaccgacagccgcagctttttcccggcgggtgtc
gaggagtgcagcgatccgcggctggccattctggacctgcacccgaccggcccgcagtgg
ggcgcaggtccttctccggcgctgggcaagactgcagagcttgaaaacgctatcgcagct
gagcatccggcgcttcgcgactggttgatcagggcgggaatggaacacgaacgtcgcatc
ctgcggctgcccattgggcggctgacgtggcattatcccgagcctgacattctgcaactg
gaattcgtccttccgcctggatgctttgccaccgtattggtgcgcgagcttgtcgatctg
gtgccggttgggcagacggacagcccatgcgtattctga
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