Proteus vulgaris: CRN77_03090
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Entry
CRN77_03090 CDS
T05486
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pvg
Proteus vulgaris
Pathway
pvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRN77_03090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvg03019
]
CRN77_03090
Enzymes [BR:
pvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CRN77_03090
Messenger RNA biogenesis [BR:
pvg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CRN77_03090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
PIN_9
CCDC138_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATM98766
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All DBs
Position
700788..702092
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AA seq
434 aa
AA seq
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MSKTYLTEKKFSDFALHPKVIEALEKKGFSNCTQIQALTLPITVKGQDIAGQAQTGTGKT
LAFLTSTFHYLLTHPAKEGHETNQPRALIMAPTRELAVQIYSDAKELAQNTGIKMGLAYG
GDGYDEQLKVLNNGVDIVIGTTGRLIDYVKQGHINLSAIQVVVLDEADRMYDLGFIKDIR
WIFRRMPVATERMNMLFSATLSYRVRELAFEQMNNPEYVEVEPEQKTGFSIKEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCDDIWAHLAADGHRVGLLTGDVPQKKRLRILE
DFTQGNIDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGNSGNSISLA
CEEYALNLPAIETYIQHAIPVSKYNSDALLADLPEPKRRHRPRQSQPRRNNAPARNNRGN
NTQRNNRNKRPSHP
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacatatttgacagaaaagaagttttccgacttcgccttgcatccaaaagtg
atagaagcccttgagaaaaaagggttctctaattgtacacaaattcaggcattgacgtta
cctatcactgtgaaaggtcaagacattgccgggcaagcccaaacaggaacaggcaaaacg
ttggcgtttttaacttcaacgtttcattatcttttaacgcaccctgctaaagaagggcat
gaaaccaatcaacctcgtgcacttattatggcgccaacacgcgaattagccgtgcagatc
tattctgatgctaaagagcttgcgcaaaatacagggattaaaatgggtctcgcctacggt
ggcgatggctatgacgaacaactcaaagtattaaataatggtgttgatattgttattggc
acaacaggtcgtttaattgattacgttaagcaaggtcatattaacctaagcgcaatccaa
gttgtggtacttgatgaagctgacagaatgtacgatctcggctttattaaagatattcgt
tggattttccgtcgtatgccagttgcgactgagcgtatgaatatgctgttctctgcaacg
ctttcttaccgtgtaagagaactggcttttgagcagatgaataatccagaatatgttgaa
gttgaacctgaacaaaaaacaggttttagcataaaagaagaactcttttatccttcaaat
gaagaaaaaatgcgtcttcttcaaacattgattgaagaagaatggccagatcgctgtatc
atttttgccaatacaaaacatcgttgtgacgacatttgggcgcaccttgccgcagatggg
caccgtgttggcttattaaccggtgatgttcctcagaaaaaacgtctacgcattttagaa
gattttacccaaggtaatattgatattctggttgccactgacgttgccgctagaggtctc
catattccatcagtaacacatgtttttaactatgatttacctgatgactgtgaagactat
gttcaccgtattggtagaacaggacgcgctggaaatagtggtaactcaatcagccttgca
tgtgaagagtatgcgctgaatttacctgctattgagacctatattcaacatgctatcccc
gtgagtaaatataatagtgatgcgttattagctgatcttcctgagcctaaacgccgtcac
cgtcctcgccaaagtcagcctcgtcgcaacaatgcgccggcgcgaaataacagaggaaat
aatactcaacgtaacaaccgaaataaacgcccgagtcatccataa
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