Pseudescherichia vulneris: LMA04_20340
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Entry
LMA04_20340 CDS
T08658
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj02020
Two-component system
pvj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LMA04_20340
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LMA04_20340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvj03021
]
LMA04_20340
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pvj02035
]
LMA04_20340
Transcription machinery [BR:
pvj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LMA04_20340
Bacterial motility proteins [BR:
pvj02035
]
Flagellar system
Flagellar assembly proteins
Stator
LMA04_20340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
HTH_23
UPF0147
TgpA_N
SapB_1
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
WAH52392
LinkDB
All DBs
Position
4265113..4265832
Genome browser
AA seq
239 aa
AA seq
DB search
MNTLYTADGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVDRYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAMGQLEQELGRNATETEV
AQRLNISVEEYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQQENPLHQLLESNLRH
RVMEAIEALPEREQLVLTLYYQEELNLKEIGAVLDVGESRVSQLHSQAIKRLRTKLGKL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaatacactctataccgctgatggtgtaatggataaacactcgctgtggcaacgttat
gtaccgctagtgcgtcacgaagcattgcgcctgcaggtgcgcttgccggcgagtgtggaa
ctggacgatctgctacaggcgggcggtatcgggttattgaatgcagttgaccgatacgac
gctctgcaaggaacggcatttaccacttacgcagtgcagcgtattcgtggggccatgctg
gacgagttgcgcagccgcgattgggtgccacgtagcgtccggcgtaacgcccgcgaagtg
gcgcaggcgatggggcagctggagcaggagttaggccgtaacgcaacggaaaccgaggtt
gcgcagcggctcaatatttctgtggaagagtatcgtcagatgttgctcgacaccaataat
agccaactcttctcctatgacgagtggcgtgaagagcatggcgatagcattgagctggtg
accgacgatcaccagcaggagaacccgttacatcagctgctggagagcaatctccgccat
cgcgtgatggaggcgatcgaagccttgccggagcgtgagcagctggtattgacgctctac
taccaggaagagctgaatctcaaagagatcggcgcggtgctggacgtgggagagtcgcgg
gtaagccagctccatagccaggctattaaacgcttacgtaccaaactgggtaagttatag
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integrated database retrieval system
