Penaeus vannamei (Pacific white shrimp): 113802632
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Entry
113802632 CDS
T06111
Name
(RefSeq) cartilage oligomeric matrix protein-like
KO
K04659
thrombospondin 2/3/4/5
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04145
Phagosome
pvm04512
ECM-receptor interaction
pvm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113802632
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113802632
09142 Cell motility
04820 Cytoskeleton in muscle cells
113802632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113802632
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvm04147
]
113802632
00536 Glycosaminoglycan binding proteins [BR:
pvm00536
]
113802632
Membrane trafficking [BR:
pvm04131
]
Endocytosis
Phagocytosis
Opsonins
113802632
Exosome [BR:
pvm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113802632
Exosomal proteins of colorectal cancer cells
113802632
Exosomal proteins of bladder cancer cells
113802632
Glycosaminoglycan binding proteins [BR:
pvm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113802632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_3
TSP_C
EGF_3
EGF_MSP1_1
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
113802632
NCBI-ProteinID:
XP_027209042
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MNAESLAWAVKMGVLALLLATPTHANNTNLYYGVDGWLPVGVVQEVQDGVSAIMCGILCT
FADCVGFTLEPSAAGRYCALYTNVTDFASNDTDTKMYLRYKHLCFYNESNCHDNATCLHY
DGENHTCTCVPGYVGDGFTCEGVNCTSTFNETWYICDRCPPGYGGNGQTCFDLQCPPGSA
GDGETCGPDNDQDGFPNSGLPCGVPGCVQDNCPTWPNAGQEDADGDGLGDACDDDADDDG
LANAADNCPAVNLTADSDSDGDGVGDACDNCPANVNSDQMDTDGDNIGDPCDPDSDSDGV
SDVADNCPKIVNADQLDTDGDGLGDACDNCPSAANPDQADADKDLIGDACDDDIDTDMDS
IQDSVDNCPIDANSDQGDVNGDGVGDVCDLDADSDGILSAFDNCPLVPNADQDDMEGDGV
GDACALDFDGDGHLDANDICPKNNAIFEQDLGVLQGLEYDDPSSPDPAKWISSAKGIQIE
QTESSDPATGLGNVRISGLDLEATLGAMDDGDDDFMGLTFSFHSYFGFYLVTWKQEGESY
SSGGYDAYGEAGIHLKLVTSPAGPSKRLKTALFDTPSVAGHAPPLTPWNSVEATLEFIDI
DEG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggagagcctagcgtgggcggtgaagatgggcgttctggctctcctcttggcc
acgcccacccacgccaacaacacgaacctgtactacggggtcgacggttggcttcccgtt
ggcgtggttcaggaggtccaggatggagtgtcagccataatgtgcggaatcctgtgtacc
tttgctgactgtgttggcttcactctcgaaccgtcagccgctggtcgctactgcgccctc
tacacgaacgtcactgacttcgcaagcaatgacactgacactaagatgtacttgcggtac
aaacacctgtgcttctacaacgagagcaactgccatgacaacgccacgtgcctccattat
gacggggagaaccacacctgtacttgtgtccctggctatgttggggacggatttacctgt
gagggtgtaaactgcacgtccacctttaacgagacctggtacatctgcgacaggtgtcca
ccgggttatggcgggaatgggcagacctgttttgacctgcagtgtccgccgggctccgcg
ggcgacggcgagacctgcggacccgacaacgaccaggacggcttccccaactccgggctt
ccctgcggcgtccccggctgcgtccaggacaactgcccgacgtggcccaacgctggccag
gaggacgccgacggggacggcctcggcgatgcgtgcgacgacgacgccgatgacgacggc
ttggccaacgctgcggacaactgccctgccgtaaacctgaccgctgacagcgacagcgat
ggcgacggcgtgggtgatgcctgtgacaactgccctgccaacgtcaactcggaccagatg
gatactgacggtgacaacatcggcgacccatgtgatcctgacagtgacagtgacggcgtt
tccgacgtcgccgacaactgcccgaaaattgtcaacgcggaccagcttgacaccgacggc
gacggcctgggtgacgcgtgtgacaactgtccttcggctgccaacccagaccaggctgac
gcggacaaggacctcatcggtgacgcttgcgatgatgacatagacacggacatggactcc
atccaggacagcgtggacaactgcccgatcgacgccaacagcgaccagggcgacgtaaac
ggggacggcgtgggcgacgtgtgcgacttggacgccgattccgacggcatcctctcggcg
ttcgacaactgcccgctcgtgcccaacgccgaccaggacgacatggagggcgacggcgtg
ggcgatgcatgcgcactcgacttcgacggcgacggccacctcgacgccaacgacatctgc
cccaagaacaacgccattttcgagcaggatttgggtgtcctacaggggttggagtacgac
gatcccagctcccccgaccccgctaagtggatctcctcggccaagggaatccagattgaa
cagacagagagttctgatccagcgacgggactagggaatgtcaggatcagcggactggac
ctcgaagcaactcttggcgccatggatgatggtgatgacgacttcatggggcttacattt
agttttcacagttacttcgggttctatttggtgacgtggaagcaagagggtgaatcctac
agttcaggcggctacgatgcctatggtgaagcgggaattcacctgaagttggtcacctct
ccagccggacccagcaaacgcctcaagacagctctctttgacacgccttcagtggctggc
catgcaccaccactcaccccgtggaactctgtagaggctactttggaattcatcgacatt
gatgaaggatag
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integrated database retrieval system
