Candidatus Planktophila vernalis: A7sIIA15_03490
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Entry
A7sIIA15_03490 CDS
T05319
Name
(GenBank) primosomal protein N' (replication factor Y) (superfamily II helicase)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pvn
Candidatus Planktophila vernalis
Pathway
pvn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A7sIIA15_03490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvn03400
]
A7sIIA15_03490
Enzymes [BR:
pvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A7sIIA15_03490
DNA repair and recombination proteins [BR:
pvn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A7sIIA15_03490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
ASY19941
UniProt:
A0A249KT39
LinkDB
All DBs
Position
661631..663514
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AA seq
627 aa
AA seq
DB search
MATPRLFRLKSQLAPAPEGPVATELPYARIYVDTGVFHLDTPYDYEVPEKFSEIVKTGVR
VQVPFGNREVEGLVIERVVAPSVISGLKSITRVLSHHLVATPKSLELIAQTAQRWATNPW
DVIRSAIPPRVAAVDKAFAPTALRSAISSNQSDVCFRAFEPHISAHGQVASIALDSIRKG
SVLIVAPDERDIIAICAHLQASTAPVVRIDSGLSRNERYANFLQSMQEQHQIVIGSRSAV
FAPLPSASTIIVFKESSPDLYEVRSPAWNARDVAIMRKSIDSARVILCGFVPSLDVAALI
DTKRISYFNSSAKVSVKAFTPVDSSLLPGRIFSDIRSNISQGPVLFLLPRKGYANGILCA
HCKNVALCACGGRLHLTSKNADPACRICGTLTKHWKCSFCARDKKFVVSRGIERAQEEIA
RAFPNTAIVLSFGDVIKDHVESKPCIVLATPGAIPQVNGGYSAVIVLEGLSYFSHDDLRA
NERANELFFEVAGSVKKGGVVLLAIDDSHPIVSSLIRWNPSAILKRELAQRAEISFPPSV
NSAVMILPTAQASPLVSGINKAISDARLASDTRVLGPTKIDSQSSKIVVLSSSDSRTALT
AFLHELMRRRSIAKKSDSSLRIDPYSL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacgccacggctgtttagactcaagtctcagctagcacctgcaccagagggacct
gtcgcaacggaattaccctatgcccgcatctatgttgatacaggtgtgtttcatttagat
acaccttatgactatgaggtcccggagaaattctctgaaatagtgaaaactggtgtgcgc
gtacaagttccatttggaaaccgtgaagtagagggccttgtcatcgaacgtgtcgttgcg
cctagcgttatcagcgggcttaaatcgataactagagttctttctcatcatctagttgcc
acaccgaaatccctcgaactgatagctcaaactgcccaaaggtgggccacaaatccttgg
gatgtgattagaagtgctatcccacctagagtcgcagccgtcgataaagcttttgcacca
actgcattaaggagtgctatatctagcaaccaatctgatgtttgttttcgggctttcgag
ccgcatatttcagcacatggacaagttgcatccatagcacttgattcgatccgcaaggga
tcagtgttaattgttgcgccggatgagcgtgacatcatagccatctgcgcccatcttcaa
gcttcaactgcacccgttgtgcgtattgatagtggactttcacgcaatgagagatatgcg
aatttcttgcaatctatgcaggaacaacatcagatcgttattggttcaaggagcgctgtc
ttcgccccgttaccgtcagcatccaccatcatagtttttaaggaatcttcaccggatcta
tatgaggttcgctcacctgcatggaatgcgcgcgatgtcgcaatcatgcgaaagtcaata
gattctgctcgagtgattctgtgtggatttgtcccgtctctagatgtagctgcactcata
gatacgaagagaatttcctacttcaattcaagtgcaaaggtttcggtgaaggccttcaca
ccagttgattcttcgctcttgcctggacgaatcttttcagacattcgctcgaacatctcg
caaggcccagttttattcttattacctcgcaagggctacgccaatgggattctgtgtgcg
cattgcaaaaatgttgccctatgtgcctgtggtggtcgactacatctcaccagcaagaac
gccgatccagcttgtcgtatctgtggaaccctgactaagcattggaaatgcagtttctgt
gcgcgagataagaagttcgttgtctctcgaggaattgaaagagcccaagaagagattgca
cgcgcttttccaaatacagccatagttttatcctttggcgatgtcattaaggaccatgtt
gagagcaaaccatgcatagttctggcaactcctggtgcgataccgcaagtaaacggtggc
tacagcgcagttatagttctggaaggtctttcctattttagccacgatgatttacgagca
aatgagcgagcaaatgaactcttctttgaagtagcaggatcagtaaagaaagggggagta
gttcttctagcaattgatgattctcacccgatagtttctagtctgattcgttggaatcca
tctgcaattttgaagcgagaattagcccagcgagctgagatttcttttccaccatctgtt
aatagtgctgtgatgattcttccaacggcgcaagcaagcccgctcgtcagtggaataaac
aaagccatttcggatgcacgcttggccagtgatactcgtgtattgggtccaaccaagatt
gatagccaatcaagcaagatagtggttctttcttcatcggactctaggactgctctgaca
gcatttctacatgagttaatgcgacgcagaagtatcgctaagaagagtgattccagcctt
cgaatagatccatattcactttag
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