Paenibacillus vortex: PVOR_29289
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Entry
PVOR_29289 CDS
T05385
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pvo
Paenibacillus vortex
Pathway
pvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVOR_29289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvo03019
]
PVOR_29289
03009 Ribosome biogenesis [BR:
pvo03009
]
PVOR_29289
Enzymes [BR:
pvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVOR_29289
Messenger RNA biogenesis [BR:
pvo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PVOR_29289
Ribosome biogenesis [BR:
pvo03009
]
Prokaryotic type
rRNA helicases
PVOR_29289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
EFU38704
UniProt:
A0A2R9SMU7
LinkDB
All DBs
Position
complement(115136..116482)
AA seq
448 aa
AA seq
DB search
MTSTTFHTLGITEDLSSRLAEFGIVTPSPVQAEAIPPILEGKDVLATSQTGTGKTLAYLL
PVLQSIDPEIKGAQKLILAPTQELAVQIVRESERYGETRGIGVLGLIGGAAAKRQIEKLK
SHPQLIVGTPGRVRELIEIRKLKMHQVTTIVVDEVDQVFNLGGAGDVDRILRSALRDRQL
VFLSATVSPETAELVKKEMDQPVEIGIDPEQRTPSALEHYYFVTEERDKLDMLRRVVRHY
NPDRAIVFVNATEDLAEVEAKLNYLGLNAAAIYGDADKMTRSRVLNAFREGRTKLLVASD
VAARGLDIEGLGMVINYDPPIDAEHYTHRAGRTGRMGRSGMAITLVTDRQTFIMRKFNRE
LGISIEERALYGGKVRTPRSAPPDRRSGARGPAGETARKDKPAGKPASISVQGKAGSGKA
SGERQSERERDRKNKGAPKWLKNKPPRG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgactacatttcatacattaggaataacagaggatttgtcctccagacttgcg
gagttcggcatcgttacgccttctcccgttcaggctgaagctatcccgcccatactggaa
ggcaaggatgtgcttgcgacttcccagacaggcacaggaaagacactggcatatctgctg
cccgtgcttcagagcatcgatccggagatcaagggagcacagaaactgatccttgctccg
acacaggaacttgctgttcagattgtcagagagagtgagcgttacggggagacccgagga
atcggtgtgctcggattaatcggcggggccgcggccaagcgccaaatcgagaagttgaag
tcgcatccgcagctgattgtcgggacaccggggcgagtacgtgagctgatcgaaatcagg
aaactcaagatgcaccaagtgaccactattgtggttgacgaggtggatcaggtgttcaat
ctcggcggtgccggcgatgttgatcgcattctgcgcagtgcgcttcgcgaccgccaattg
gtattcttatccgccacggtgagtccggagacagcggagcttgtcaagaaggagatggac
cagccagttgagatcgggatcgatccggagcagcggacaccgtctgcgctggagcattat
tattttgtgacggaagagcgtgacaagttggacatgctgcgcagagtggtgcggcattac
aaccccgatcgggctattgttttcgtgaatgccaccgaggatttggcagaagtcgaggcg
aagctgaactatctgggattaaatgcagctgctatatacggagatgcggacaagatgaca
agaagccgcgttctgaatgcgtttagagaagggcggaccaaacttcttgtagctagtgac
gttgcggccagggggcttgatattgaagggctcgggatggtgatcaactacgatccgccc
attgatgcggagcattatacccaccgtgccggtcgtacagggcgtatggggcgaagcggc
atggcgattacgcttgtcacggaccgtcagacgttcattatgcgcaagttcaatcgtgag
cttggcatttcgattgaagagcgcgcactctatggcggcaaggtaagaacaccgcgttca
gcgcctccggaccggagaagcggcgcccgtgggccagcaggggaaaccgcccgtaaagat
aagccagcgggcaagccggcttccataagtgtgcaaggaaaagcgggaagcggaaaggca
tccggtgaacggcaaagcgagcgggagcgcgaccgcaagaacaagggtgctccgaaatgg
ctgaagaataagcctccacggggctaa
DBGET
integrated database retrieval system