Phaseolus vulgaris (common bean): PHAVU_005G0020000
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Entry
PHAVU_005G0020000 CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PHAVU_005G0020000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvu03400
]
PHAVU_005G0020000
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
PHAVU_005G0020000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
18629606
NCBI-ProteinID:
XP_007148626
UniProt:
V7BU93
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Position
5:complement(134718..143844)
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AA seq
703 aa
AA seq
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MEPPKIKRLTESVVNRIAAGEVIQRPVSAVKELLENSLDASASSVNLLIKDGGLKLIQVS
DDGHGIRFEDLPILCERHTTSKLSAFEDLQSIKSMGFRGEALASMTYVGHVTVTTITKDQ
LHGYRVSYRDGVMEHEPRPCAAVKGTQIMVENLFYNMTARRKTLQNSSDDYSKIVDLVSR
FAIHHTKVSFSCRKHGAVRADVHTVATSSRLDAIKSVYGVSVVRNLIEIEASDDDPSSSV
FEMHGYMSNANYAAKKITMVLFINDRLVECSALKRAIEIVYAATLPKASKPFIYISIVLP
PENMDVNVHPTKREVSLLNQEVIIEKIQLVVESTLRSSNETRTFQEQTTVQSPLPRINIS
KEVNLSPMPTGSRSLKVPVHKMVRTDSSDPAGRLHAYTKITSDRNLEKSASLNAVRSSVR
QRRNPKDSLELTSVQELLDEINSNCDPGMMDIVRHCTYVGMADDVFALLQHNTCLYLANV
VNLSKELMYQQVLSRFGHFNAIQLNDPVPLKDLIILALKEEDVDSTCSDDDVLKEKIAEM
NTELLIQKTEMLEEYFGIHIDEHGNVSRLPVILDQYTPDMDRVPEFALCLGNDVDWEDER
KCIQTISAALGNFYAMHPLMLPNPSGEGFLFYKRKLMDDYVEENNHDNIGSEVIDNKVEH
ELLSEAETAWAQREWSIQHVLFPSMRLFFKPPASMATDGTFVQ
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcccaaaatcaaacgcctaactgaatccgttgtcaaccggatcgccgccggc
gaggtcatccagcgccctgtctccgccgtcaaggagctcctggagaacagcctcgacgcc
tccgcctcctccgtcaatctcctcatcaaggatggcggcctcaagctcatccaagtctcc
gacgacggccacggaatccgattcgaggacttgccgattctgtgcgagcgccacaccacg
tccaagctctccgcgtttgaggacctgcagagcatcaagtccatgggatttcgcggcgag
gctctcgccagcatgacgtacgtcggtcacgtcaccgtcaccaccattaccaaagaccag
ttgcacggttacagggtgtcctatagagatggtgtcatggagcacgaacccaggccatgt
gctgctgttaaaggaacacagataatggttgagaatctgttctataacatgactgcaagg
aggaagacactgcagaattcttctgatgattattcaaagattgtagacttagtaagccgg
tttgctattcatcatacaaaagttagtttctcttgcagaaagcatggagctgttagagct
gatgttcacactgttgccacatcttcaaggctcgatgccatcaaatctgtttatggggtc
tcagttgttcgcaatttgattgaaattgaagcttcggatgatgatccatcttcttcggtt
tttgagatgcatggctacatgtccaatgcgaattatgctgcaaagaaaatcacaatggtg
cttttcatcaatgatagactggttgagtgctctgcactgaagagagctattgagattgtt
tatgcagcaacattaccaaaagcatctaagcccttcatatatatctcaattgttttacca
ccagagaatatggatgtcaatgtacatccgacaaagagggaggtgagtcttttaaatcag
gaagtcatcattgagaagatacagttggtggttgaatcaacattgaggagttccaatgag
acacgaacatttcaagaacaaactaccgtgcaatccccactgcctcgtattaatataagt
aaggaggttaacctcagccctatgccaacaggttcaagatcattgaaagtgcctgtacat
aagatggttagaacagattcatcagatcctgctggaagattacacgcctacacgaaaatt
acgtctgatagaaatcttgaaaagagtgctagtttgaatgcagtaaggtcttccgttaga
caaagaaggaacccaaaagattctttggaactcactagtgttcaagaacttcttgatgaa
attaatagcaactgtgaccctggcatgatggacattgtaaggcattgcacatatgttgga
atggcagatgatgttttcgctttgcttcaacataatacgtgtctttatcttgcaaatgtt
gtgaacttgagcaaagaactcatgtatcagcaagttctcagccgttttggccatttcaat
gccattcaactaaatgatccagtccccctgaaagacttgattatattggccctgaaggaa
gaggatgtagattcaacatgtagtgatgatgacgtattaaaagagaagattgcagaaatg
aatacagaactcctgatacaaaagactgaaatgctggaggaatatttcggcattcatatt
gatgaacatggaaatgtctctagacttcctgtgatacttgatcaatacactcctgacatg
gatcgggtcccagagtttgctctttgtttgggaaatgatgttgactgggaagatgaaagg
aaatgcattcaaacaatttcagctgctctgggaaacttctatgctatgcatccattgatg
ttacccaatccatctggtgaaggatttcttttttacaagagaaaattgatggatgactat
gttgaagagaacaaccatgataatattgggagtgaagtgattgacaataaggttgaacat
gaactgctttctgaagctgagactgcttgggcgcagcgtgaatggtcaatacaacatgtg
ctttttccttctatgagactctttttcaaaccacctgcttctatggctactgatggaacc
tttgtacag
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