Phaseolus vulgaris (common bean): PHAVU_005G029400g
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Entry
PHAVU_005G029400g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PHAVU_005G029400g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvu04121
]
PHAVU_005G029400g
Enzymes [BR:
pvu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PHAVU_005G029400g
Ubiquitin system [BR:
pvu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
PHAVU_005G029400g
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Ortholog
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GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
zf-RING_UBOX
zf-Di19
Motif
Other DBs
NCBI-GeneID:
18629903
NCBI-ProteinID:
XP_007148967
UniProt:
V7BWM1
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Position
5:complement(2721438..2725601)
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AA seq
304 aa
AA seq
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MTSSHPFFDDIRSRSSVDPPQMEEPTEIGELVNEPLQTSLKPHGTVTSSVRELLECPVCL
NAMYPPIHQCSNGHTLCSGCKPRVHDRCPTCRHELGNIRCLALEKVAASLELPCKYQGFG
CMGIYPYYSKLKHESQCAFRPYNCPYAGSECSVMGDIPYLVNHLKDDHKVDMHNGCTFNH
RYVKTNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYTY
SLEVGGNGRKMIWQGVPRSIRDSHRKVRDSFDGLIIQRSMALFFSGGDKKELKLRVTGRI
WKEQ
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacatctagtcatccattctttgatgatatacgaagcagatcaagtgttgatcctcct
caaatggaagagccaactgaaattggtgaactcgtgaatgagcctctgcagacttctctt
aagcctcatgggactgttacaagcagtgttcgtgagctgttagagtgccctgtttgttta
aatgctatgtaccctccaatccaccagtgttcaaatggtcacactttatgctctggttgc
aaacccagagtccatgatcggtgccctacatgtaggcatgagcttggcaatatcagatgt
ctggcactggaaaaggtggctgcatcattagaacttccatgtaaatatcaaggttttggg
tgcatgggcatatacccatattacagcaagctaaagcatgaatctcaatgtgcatttaga
ccttacaattgtccatatgctggttcagaatgttctgttatgggtgatataccttacctg
gtgaaccatctgaaagatgatcacaaagtggacatgcacaatggttgtacttttaatcac
cgttatgtcaaaacaaacccacaagaagtcgaaaatgccacgtggatgttaacggttttc
agttgctttggtcagtatttctgtctacactttgaagcttttcagctgggaatggctcct
gtctacatagcttttttgcggttcatgggggatgacaacgaggccaagaactacacatac
agtttggaggtgggtggaaatgggaggaagatgatttggcagggtgtgcctagaagcatt
agggatagccaccgtaaggttcgtgacagttttgatggtctgataattcagaggagcatg
gctctattcttttctgggggtgacaagaaggaactcaaactaagagtaactgggagaatt
tggaaagaacagtga
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