Phaseolus vulgaris (common bean): PHAVU_008G183500g
Help
Entry
PHAVU_008G183500g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PHAVU_008G183500g
Enzymes [BR:
pvu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PHAVU_008G183500g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
18623284
NCBI-ProteinID:
XP_007141289
UniProt:
V7B8U9
LinkDB
All DBs
Position
8:complement(48449160..48458576)
Genome browser
AA seq
647 aa
AA seq
DB search
MASPAAVKLYMEDDQVVMDNGIVQVYLSNPGGFVTRIQYNGIDNLLETRNKSGDRGYWDV
VWSVAGSTGTTGTFQRIVGESFRVIMENEEEVEISFTSKWEPSLEGERAPLNIDKRYVML
CNSSGFYSYTIFEHLQEWPAFNIPQIRTVYKLSKDKFHYMVASDNRQRFMPLPDDRLPGR
GEVLVPPEAVLLVNPLEPEFKGEVDDKYQYSSENKDLNVHGWISSESQTDPFIGFWVIIP
SNEFRSGGPLKQNLTSHVGPISLAMFLSAHYAGEDIVLKLQPNEPWKKVFGPTFVYLNTL
LEGDDPLLLWEDAKYKTNAEVQSWPYDFPASEDFQKSSQRGSVCGTLLVKDRFLSDEKII
AEGAYIGLAPPGETGSWQRECKGYQFWSKANEKGYFSINNVRSGDYNLYAWVPGFIGDYW
SNVLLTITPGCKIEVGEVIYEAPRDGPTLWEIGIPDRSAAEFYVPDPNPNYINKLFLHHL
DKYRQYGLWERYAELYPTQDLIYTVGVSDYTKDWFFAQVTRKKEDGSYQGTTWQIKFNLD
DTEASKIYKLRLALASANVSELQVRVNDPKQDPPLLTTGVFGKDFAIARHGIHGLYWLFN
IDVPGFLLEKGVNTVFLTQTVATGPLATFQGIMYDYIRLEGPNPSSP
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaccagctgcagtgaaattgtatatggaagacgatcaagtggttatggacaat
ggcatagtgcaggtgtatttatccaaccctggtggatttgttactagaattcagtataat
ggcattgataatctgcttgaaactcgtaacaaaagtggagatagagggtactgggacgtt
gtttggagtgtagctggaagtacaggaacaactgggacattccaaaggattgtgggagaa
agtttcagagttataatggaaaatgaagaagaggttgaaatctcattcacaagtaagtgg
gaaccatctctggagggagagagagcacctcttaatattgataagaggtatgtgatgctt
tgtaactcctcaggattctactcatacaccatctttgaacacctacaggagtggcctgct
ttcaacatacctcaaataaggactgtttacaagcttagtaaagacaagtttcattacatg
gtggcttcggataatagacaaagatttatgcctctccctgacgacagattacctggaaga
ggagaagttcttgttccgccggaagcagttttgctagttaatcctttggagccagagttt
aaaggagaggtggatgacaagtaccaatactcaagtgagaacaaagatcttaatgttcac
gggtggataagttctgaatctcaaaccgatccatttatagggttttgggtaatcatacca
agcaatgagtttcgatccggtggtccactaaaacagaatcttacttcccatgtcggccca
ataagcctagctatgtttctgagtgctcattacgcaggagaagatatagttctgaaactc
caaccaaacgagccatggaagaaagtttttggaccgacttttgtttatcttaacacttta
ttagagggtgatgacccgcttctgctatgggaagatgctaaatacaagacgaacgcagag
gttcaaagttggccctatgattttccagcctccgaagattttcagaagtctagccaacgg
ggcagtgtctgcggcacattactagtcaaagacaggtttttaagtgatgagaagataata
gcagaaggcgcttatataggactggcaccaccaggagaaactggatcctggcaaagagaa
tgcaagggataccaattttggagcaaagcaaacgagaaagggtacttctcaatcaacaac
gtacgcagtggggattacaatctctatgcatgggttccaggtttcattggagactattgg
agcaatgttctcctcaccataacaccaggttgtaaaattgaagttggagaggtgatttac
gaggctccaagagatggaccaacactatgggagataggcattccagatcgttctgctgct
gaattctatgtacctgatcccaatcccaactacatcaacaagctttttctccatcatcta
gacaagtataggcaatatgggttgtgggaaaggtatgcagaattatacccaactcaagat
ttaatttacacagtgggtgtaagtgactatacaaaagattggttttttgcacaggtcaca
aggaagaaagaagatggcagttaccaaggaactacatggcaaattaagttcaacctcgat
gatacagaggcaagtaaaatctacaagttgcgattggcccttgcaagtgcaaatgtgtca
gaattacaggttagagtgaatgatccaaaacaagatcctcctctgttgactacaggggtg
tttgggaaggactttgcaatagctagacatggaattcatggactctattggctattcaac
attgatgtgcctggttttctgctagaaaaaggtgtcaacactgtgttcttaactcagact
gtggctactggtcccttggcaacctttcagggaataatgtatgactatatacgcctagaa
ggtcctaatccttcttctccataa
DBGET
integrated database retrieval system
