Pseudomonas vanderleydeniana: HU752_010200
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Entry
HU752_010200 CDS
T07587
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pvw
Pseudomonas vanderleydeniana
Brite
KEGG Orthology (KO) [BR:
pvw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvw03032
]
HU752_010200 (topA)
03400 DNA repair and recombination proteins [BR:
pvw03400
]
HU752_010200 (topA)
Enzymes [BR:
pvw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HU752_010200 (topA)
DNA replication proteins [BR:
pvw03032
]
Prokaryotic type
DNA Topoisomerases
HU752_010200 (topA)
DNA repair and recombination proteins [BR:
pvw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU752_010200 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QXI30297
UniProt:
A0A9E6TTZ4
LinkDB
All DBs
Position
2259872..2262493
Genome browser
AA seq
873 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGTQYVVKSSIGHIRDLPTSGSASATKEPAAKRGKAAASE
APALSAKEKARKQLVSRMGVDPDHGWKARYEILPGKEKVIEELRRLAKDADTIYLATDLD
REGEAIAWHLREAIGGDDSRYKRVVFNEITKKAIQEAFSAPGELDIDRVNAQQARRFLDR
VVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEVHAGLGTTKGAK
VRFEVARENGEAFKPLNEAQAMAALEKLKASAYTIAKREDKPTSSKPSAPFITSTLQQAA
SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADAVAMARTYIEGEFGAKYLPSAPN
VYSSKEGAQEAHEAIRPSDVNTDPSKLSGMERDAERLYELIWRQFVACQMLPAQYLSTTV
SVAAGDFELRAKGRILKFDGYTRVLPQLSKPGDDDVLPDMAQGEVLKLIQLDPSQHFTKP
PARYSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVALHNRRFYSEKMGDIVTERLAES
FSNLMDYGFTADMEENLDDVAQGERDWKNVLDEFYGDFKKKLEVAEGAENGMRANQPVMT
DIPCQTCGRPMQIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESLVL
RGKHRCPICSTAMDAYLLDEKRKLHICGNNPDCAGYEIEEGNYRIKGYEGPSLECDKCGS
EMQLKTGRFGKFFGCTNPTCKNTRKLLRSGDAAPPKMDPVKMPELKCEKVDDTYILRDGA
SGLFLAASQFPKNRETRAPLVLEIVPHKDEIDPKYHFLCEAPQKDPDGRPAVIRYSRKTK
EQYVQTEVDGKPTGWKAFYDSGKWKVEDKRQGA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctggtcattgtggaatccccggctaaggccaagaccatcaacaagtat
ctgggaacccagtacgtggtgaagtcgagtatcggccatatccgagacctgcccaccagc
ggttcggccagtgccaccaaggaacccgctgccaagcgcggcaaggctgcggccagcgag
gcgcctgcgctctcggcgaaggagaaggcccgcaagcagctggtgtcgcgcatgggcgtc
gacccggatcatggctggaaagcccgctacgagatccttcctggcaaggagaaggtgatc
gaggagctgcgccgactggccaaggatgccgacaccatctatctcgcaaccgacttggat
cgcgagggggaagccattgcctggcacctgcgcgaagccatcggcggggacgacagccgc
tacaagcgcgtggtgttcaacgaaatcaccaagaaggcgatccaggaggccttctcggcg
cctggcgagctggacatcgaccgcgtcaatgcccagcaggcccgtcgcttcctcgatcgc
gtggttggctacatggtctcgccgctgctgtgggcgaagatcgcccgtggcctgtccgcc
ggtcgcgtgcagtcggtggcggtgaagctggtggtcgagcgtgaacgtgagattcgcgcg
ttcatcccggaagagtactgggaagtgcatgccggcctgggcacgaccaagggcgccaag
gtgcgcttcgaggtggcgcgggagaacggcgaggccttcaagccgctgaacgaagcccag
gccatggcggcgctggagaagctcaaggcctcggcctacaccatcgccaagcgtgaagac
aagccgaccagcagcaagccttcggctccgttcattacctccactctgcagcaggccgcg
agcaaccgcctgggcttcggggtgaagaagaccatgatgatggcccagcgtctgtacgaa
gcgggctacatcacctacatgcgtaccgactccaccaacctctcggcagacgccgtggcg
atggcgcggacctatatcgagggcgagttcggcgcgaaatacctgccgtccgcaccgaac
gtctacagcagcaaggaaggtgcccaggaggcgcacgaggcgatccggccttcggacgtc
aacactgacccgagcaagctctcgggcatggagcgtgacgccgagcgcctgtacgagctg
atctggcgccagttcgtcgcttgccagatgctgccggcgcagtacctgtcgaccactgtc
agcgtcgccgctggcgacttcgagctgcgtgccaagggtcgcatcctcaagttcgacggc
tacacccgggttctgccacagctgagcaagccgggcgacgatgatgtcctgccggacatg
gcccagggcgaagtgctgaagctgatccagctcgacccgagccagcacttcaccaagccg
ccggcgcgttactccgaagccagcctggtcaaggaaatggagaagcgtggtatcggtcgt
ccttcgacctatgcggcgatcatttccaccatccaggatcgcggctacgtggcgttgcac
aatcgtcgcttctactccgagaagatgggcgacatcgttactgagcgcctggcggaaagc
ttctcgaacctgatggactacgggttcaccgcggacatggaggagaacctcgacgacgtg
gcccagggcgagcgtgactggaagaacgtgctcgacgaattctacggcgacttcaagaag
aagctggaagtggccgagggtgcggaaaacggcatgcgtgccaaccagccggtcatgacc
gatatcccatgccagacctgcggccggccgatgcagatccgtaccgcctcgaccggtgtg
ttcctcggttgctcgggctacagcctgccaccgaaagaacgctgcaaggcaaccgtcaac
ctggtgccgggcgacgaaatcgccgcggacgacgagggtgagtcggaatcgctggtgttg
cgtggcaagcatcgctgcccgatctgcagcaccgcgatggacgcctacctgctggacgag
aagcgcaagctgcacatctgtggcaacaacccggattgcgccggctacgagatcgaggaa
ggcaactaccggatcaagggttacgaagggccgagcctggagtgcgacaagtgcggtagc
gagatgcagctcaagaccggccgtttcggcaagttcttcggttgcaccaacccgacctgc
aagaacacgcgtaagctgctcagaagcggtgatgcggcgccgccgaaaatggacccggtg
aagatgccggagctcaagtgcgagaaggtcgacgacacctacatcctgcgggatggtgcc
tcgggcctgttcctggccgcgagccagttcccgaaaaatcgcgagacccgtgcgccactg
gtgctcgaaatcgtcccgcacaaggatgaaatcgatccgaagtaccacttcctctgcgaa
gcgccgcagaaggacccggacggccgtccagcggtgatccgctacagccgcaagaccaag
gagcagtacgtgcagaccgaggtcgatggcaagccgacgggctggaaggcgttctacgac
agcggcaagtggaaggtggaagacaagcgtcagggtgcctga
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