Pseudomonas vanderleydeniana: HU752_016740
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Entry
HU752_016740 CDS
T07587
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pvw
Pseudomonas vanderleydeniana
Pathway
pvw03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pvw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HU752_016740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvw03400
]
HU752_016740
DNA repair and recombination proteins [BR:
pvw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HU752_016740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Tom5
Motif
Other DBs
NCBI-ProteinID:
QXI25629
UniProt:
A0A9E6PFM7
LinkDB
All DBs
Position
3702694..3703533
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AA seq
279 aa
AA seq
DB search
MVRAIWKGAISFGLVHIPVSLSTAVHAEGVDFDWLDKRSMDPVGYKRVNKVTGKEIDKSQ
IVKGVEYEKGRYVVISEEEIRKARPEATQTIDIFSFVEAGEIPLQHFDTPYYLSPDRRGG
KVYALLRETLQGTGKVALATVVLHTRQHLALLRPLDKALVLITLRWPEEVRRLETLELDS
SVTDTQLDKRELEMAKRLVRDMSGPWTPGDYHDAFRQTILDLVQEKASKGKIETVEKGDG
SEDKGADIIDLTELLKRSLAGTGGARTKKPAARRTHKAS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggtccgggcaatctggaaaggcgcgatcagcttcggtctggtccatatccccgtttcc
ctgagcactgccgtgcatgccgagggcgtcgatttcgactggttggacaagcgcagcatg
gatccggtgggctacaagcgagtgaacaaggtcactggcaaggaaatcgacaagagccag
atcgtcaagggtgttgaatacgaaaagggccgttatgtagtgatcagtgaggaagaaatc
cgcaaggctcgacccgaagcgacccagaccatcgatattttttccttcgtcgaggctggc
gagattcccttgcagcatttcgataccccgtactacctcagcccggatcgccgtggcggc
aaggtttatgcactcctgcgagaaaccctgcagggcaccggcaaggtcgccctggccacg
gtggttctacacactcggcagcatctggcattgttgcgtccgctggacaaggcgctggtg
ctgatcaccctgcgctggccggaggaagtacgccggctggaaacgctggaactggacagt
agtgtgaccgacacccagctggacaagcgcgagctcgagatggccaagcggctggtgcgg
gacatgagtgggccctggacgcccggcgattaccacgatgcatttcgccagaccattctc
gaccttgttcaggaaaaggccagcaaaggtaagatcgagaccgtggagaagggcgacggc
agcgaggataaaggggcggatatcatcgacttgaccgagctgctcaagcgcagtctcgca
ggcactggtggcgccagaacgaagaagcctgcggcgaggcgcacgcacaaggcatcttga
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