KEGG   Pseudomonas wayambapalatensis: HU734_019685
Entry
HU734_019685      CDS       T08016                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pwy  Pseudomonas wayambapalatensis
Brite
KEGG Orthology (KO) [BR:pwy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pwy03400]
    HU734_019685
Enzymes [BR:pwy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HU734_019685
    5.6.2.6  RNA 3'-5' helicase
     HU734_019685
DNA repair and recombination proteins [BR:pwy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HU734_019685
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII CC149
Other DBs
NCBI-ProteinID: QXI42449
LinkDB
Position
4425711..4428197
AA seq 828 aa
MPSPSDLASTWFASRNWKPFAFQRSVWAAIQRGESGLLHASTGSGKTYAVWLGALRAFAQ
LHDVRRPAPLQVLWITPMRALASDTARALQAPLDELGLNWTIGVRSGDTTSAERARQARR
LPSTLVTTPESLTLLLTREQAAADFASLRLVVVDEWHELLGNKRGVQLQLALARLRRWQP
QLVVWGLSATLGNLPHALEVLLPAGGRLVQGRQDKRILVDTLVPSAIERFPWAGHMGLKM
LPQVSAEIAASANSLVFTNTRAQAELWYQALLEAHPEWAGLIALHHASLARHARDWVERS
LKQGTLKAVICTSSLDLGVDFLPVERVLQIGSAKGIARLLQRAGRSGHAPGRTSRVTLVP
THSLELVEAAAARQALASGHIEARYSPRLSMDVLVQHLVSMALGSGFRPAELFEEVRSTW
AFRDLEESQWQWALSFVRNGGSSLTAYPDYQRVAAHPDGIWRVASERLARRHRLGIGTIV
SDASLQLKYWSKGGGGKSLGSVEESFIARLKPGDALLFGGRILELVRVENMTAYVRRSTA
RKAAVARWNGGRMPLSSELAQALVERLDAAAHGRYEGAEMHAVRPLLTLQASWSALPTQR
TLLAETLHSRQGWHLFLYPFAGRMANLGLANLIAWRVSRVQPLSVSIAVNDYGFELLAAS
PVDWAAHLPAALAADNLLEDVLASLNAGEMALRRFREIAQIAGLIFGGYPAAQKSTRQLQ
ASSGLFYEVFRKHDAGNLLLGQARDEVLREELEIERLHQQLQKMAGLRLDLHALRRPGPL
AFALLVEGMRETLSTEKLADRIARMVADLEKAASRTMSDLAGTERRKS
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgccatccccttccgacctcgccagcacctggtttgcctcccgcaactggaagccgttc
gccttccagcgcagcgtctgggcggcgatccagcgcggcgagtcgggcctgctgcatgcc
agcaccggcagcggcaagacctacgccgtctggctcggcgccctgcgcgctttcgcacag
ttgcacgacgtacgccgaccggcgccactccaagtgctgtggatcacaccgatgcgcgcc
ctggccagcgataccgcgcgcgcgctgcaagcaccgctggacgaattggggctgaactgg
accatcggcgtacgcagcggtgataccaccagtgccgaacgtgcacgccaggcccggcgc
ctgcccagcacgctggtcaccactccggaaagcctcaccctgctgctcacccgcgaacag
gctgccgccgacttcgccagcctgcgcctggtggtggtcgatgaatggcacgaactgctc
ggcaacaagcgcggcgtgcagttgcaactggccctggcccggctgcggcgctggcaaccg
caactggtggtgtgggggctgtcggccacactgggcaacctgccgcacgcccttgaggtc
ttgctgcctgcaggcgggcgactggttcagggccgtcaggacaagcgcatcctggtagac
accctggtgccgagcgcgatcgaacgcttcccctgggccgggcacatggggctgaagatg
ctccctcaggtcagcgccgagatcgcggccagcgccaacagcctggtgttcaccaacacc
cgcgcccaggccgagctctggtaccaggccctgctcgaggcgcatcccgagtgggcggga
ctgatcgctctgcatcacgcatcgcttgcccggcacgcccgtgactgggtcgagcgcagc
ctcaagcagggcacgctgaaggcggtgatctgcacctcaagcctcgacctgggggtggat
ttcctgcccgtcgaacgcgtcctgcagattggctcggccaaaggcatcgcccgcctgctg
caacgtgcaggccgctctgggcacgcacctgggcgtacctcgcgggtgaccctggtacca
acccacagccttgaactggtggaagcggccgcagcacgccaggcgctggcttccgggcat
atcgaggcacgctattcgccgcgcctgagcatggacgtgctggtccagcacctggtcagc
atggcgctgggcagtggtttccgaccggccgaactgttcgaggaggttcgcagcacctgg
gcttttcgcgatctcgaagagagccagtggcaatgggcactgtcatttgtgcgcaatggc
ggcagctcgctcaccgcctacccggactaccagcgcgtcgcagcgcaccccgacggcatc
tggcgcgtggccagcgagcgcctcgcccggcgtcatcgtctgggtatcggcaccatcgtc
agcgacgccagcctgcagttgaagtactggagcaaagggggcggtggcaagtcgctgggc
agcgtggaggaatctttcattgcccgtctcaagcccggtgacgcgctattgttcggcgga
cgtatcctggagctggtaagggtcgagaacatgaccgcctacgtgcgccgcagcaccgcg
cgcaaagcagcggtagcacgctggaatggcggacgcatgccgctgtcgagcgagctggcg
caggcgctggtcgagcgtctggatgctgctgcccacggccgctacgaaggcgcggaaatg
catgccgttcgccccttgctgacacttcaggcaagctggtccgccctgcccacccagcgc
actttgctggccgaaaccctgcactcgcgccagggctggcacctgtttctctatcccttt
gccgggcgcatggccaatctgggccttgccaacctgatcgcctggcgggtcagccgcgtg
cagccgctgtcggtatcgatcgcggtcaatgactacggcttcgaactgctcgcagcaagc
cctgtggactgggccgcgcacttgcccgctgcactggctgcggacaatttgctggaagat
gtactggccagcctgaatgctggcgagatggcattgcggcgctttcgtgaaattgcccag
atcgccgggctgatattcggcggctatcccgccgcgcagaaaagcacgcgccagctccag
gcctccagcggtctgttctacgaagtgtttcgcaagcatgacgctggcaatctgctgctg
ggccaggcgcgtgacgaggtgctgcgtgaggagctggagatcgagcgcctgcatcagcag
ttgcagaaaatggcaggattgcgcctcgatctgcacgcattgcgccggcccgggccgctg
gccttcgccctattggtcgagggcatgcgcgaaaccctgagcacggaaaaactggcagac
cgcatcgcccggatggtggcggatctcgaaaaggcggcgagccgaaccatgagcgacctt
gcggggactgaacggaggaaatcctga

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