Pyrus x bretschneideri (Chinese white pear): 103947149
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Entry
103947149 CDS
T03446
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03420
Nucleotide excision repair
pxb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103947149
09124 Replication and repair
03420 Nucleotide excision repair
103947149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pxb03051
]
103947149
03400 DNA repair and recombination proteins [BR:
pxb03400
]
103947149
Proteasome [BR:
pxb03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
103947149
DNA repair and recombination proteins [BR:
pxb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
103947149
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
Rad60-SLD
Rad60-SLD_2
TECR_N
Crinkler
Ubiquitin_4
Dsc3_N
BLTP1_C
Motif
Other DBs
NCBI-GeneID:
103947149
NCBI-ProteinID:
XP_009356279
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MKIFVKTLKGSHFDVEVKPEDTVADVKKHIEASKGSDVYPAPQQMLIHQGKVLKDDTTLD
ENKVAENSFVVIMLTKSTSPPGEGSGASTAATTKAPQPSAHTGAPTATLTASPAPAAAST
LPASVATPAPVASATTDSQADSYGQAASDLVAGTNLEGTIQQILDMGGGTWDRDTVVRAL
RAAFNNPARAIDYLYSGIPEQPEAPPAVRIPVGGQVANPPAQPPQSAQPASAPPSRPNAN
PLNLFPQELPNVGVGAGAAGNLDFLRDNQQFQALRSMVQANPQILQPMLQELGKQNPNLV
RLIGEHQADFLRLINEPAEGGEGNVLGDAAVPQAIAISPEEREAIERLEAMGFARAIVLQ
VFFACNKNEELTANYLLDHMHEFED
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttcgtcaagactctcaagggctcccacttcgacgtcgaagtgaagcctgag
gacacggttgctgatgtgaagaaacatatagaagcttctaagggttcagatgtataccct
gctccacaacagatgctaattcatcaaggaaaagtgcttaaagatgacacaacactggac
gaaaataaagttgcggaaaatagctttgttgtaataatgttgactaagagtacgagccca
cctggtgaaggttcaggtgcatcaactgcggctacaactaaggcaccacagccaagtgca
catactggtgccccaactgcgacattaacagcaagtccggctccagcagcagcctcaaca
ctgcccgcatctgttgccacgcctgctcctgttgcttcggctaccacggattcacaagct
gattcttacggccaagcagcatctgatctggtagctggaactaacttggagggaacaatt
cagcaaattctagatatgggtggagggacgtgggacagggatactgttgtacgtgctctt
cgtgctgcattcaacaacccagcaagagctattgactatctttattccggtatccctgaa
caacctgaagctccacctgcagtccgtattcctgtcggtgggcaagtcgcaaaccctcca
gcacaacctccacagtcagcacaaccagcatccgctcctccaagcagacctaatgccaat
cctttaaacctttttccacaggaacttccgaatgtgggtgttggtgctggtgctgcaggc
aatcttgattttctacgtgacaaccaacagttccaagccttgcgatctatggtgcaggct
aatccgcaaatattgcagcctatgcttcaagagttggggaaacaaaaccctaatctagtg
aggctaatcggtgagcatcaggctgacttccttcgcctgattaatgaacctgctgaaggt
ggagaagggaacgtactgggggatgcagcagtgccacaggcaatagctatcagtcctgag
gagcgtgaagctatagaacgtcttgaagcaatggggttcgctcgagcaattgtattgcag
gtgttctttgcctgcaacaagaacgaagaattaaccgccaactacctcttagaccacatg
catgaatttgaggactaa
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