Paenibacillus xylanexedens: BS614_22590
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Entry
BS614_22590 CDS
T04676
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pxl
Paenibacillus xylanexedens
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pxl03032
]
BS614_22590
03036 Chromosome and associated proteins [BR:
pxl03036
]
BS614_22590
03400 DNA repair and recombination proteins [BR:
pxl03400
]
BS614_22590
DNA replication proteins [BR:
pxl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BS614_22590
Chromosome and associated proteins [BR:
pxl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BS614_22590
DNA repair and recombination proteins [BR:
pxl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BS614_22590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF2267
HU-DNA_bdg
DUF1512
RsbRD_N
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
APO48373
UniProt:
A0A1L5LY87
LinkDB
All DBs
Position
complement(5183803..5184075)
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AA seq
90 aa
AA seq
DB search
MNKSDLITHVSEATELSKKDVTKAVDAVFEAISEALQSGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIPASKIPAFKPGKALKDGIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcagacttgattacacacgtatctgaagcgactgaattgtccaagaaagat
gtaacgaaagcggttgatgccgtattcgaagcaatctctgaggctcttcaaagcggagat
aaagtacaattggttggttttgggaacttcgaagttcgcgagcgctctgcacgtaaagga
cgcaacccgcaaacaggtgaagaaatcgaaattcctgcgagcaaaattcctgcattcaaa
ccaggtaaagcgctcaaagacggaattaaataa
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