Pseudomonas xantholysinigenes: HU772_008270
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Entry
HU772_008270 CDS
T07643
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pxn
Pseudomonas xantholysinigenes
Pathway
pxn00071
Fatty acid degradation
pxn00280
Valine, leucine and isoleucine degradation
pxn00310
Lysine degradation
pxn00362
Benzoate degradation
pxn00380
Tryptophan metabolism
pxn00410
beta-Alanine metabolism
pxn00640
Propanoate metabolism
pxn00650
Butanoate metabolism
pxn00907
Pinene, camphor and geraniol degradation
pxn00930
Caprolactam degradation
pxn01100
Metabolic pathways
pxn01110
Biosynthesis of secondary metabolites
pxn01120
Microbial metabolism in diverse environments
pxn01200
Carbon metabolism
pxn01212
Fatty acid metabolism
Module
pxn_M00087
beta-Oxidation
pxn_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pxn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HU772_008270 (fadB)
00650 Butanoate metabolism
HU772_008270 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HU772_008270 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HU772_008270 (fadB)
00310 Lysine degradation
HU772_008270 (fadB)
00380 Tryptophan metabolism
HU772_008270 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HU772_008270 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HU772_008270 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HU772_008270 (fadB)
00930 Caprolactam degradation
HU772_008270 (fadB)
Enzymes [BR:
pxn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HU772_008270 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HU772_008270 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HU772_008270 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HU772_008270 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXI40058
UniProt:
A0A9E6TY55
LinkDB
All DBs
Position
1824363..1826510
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLQVPTVVAINGIALGGGLE
MCLAADYRVMSSAAKIGLPEVKLGIYPGFGGTVRLPRLIGSDNAIEWIASGKENRAEDAL
KVGAVDAVVAPELLQAGALDLVKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSVAESLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGKRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVK
DDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVADASVLDVLKPIVFEQREVSDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAKNGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgcctcactctgaacgagctg
cgccaggcagtggacgcgatcaaggccgatgcgtcggtcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagttcgtcgacaacttcaagctg
cccgaggccgaactggtcgccggcaacctggaagccaaccgcattttcagtgacttcgaa
gacctgcaggtgccgaccgtcgtcgccatcaacggcatcgccctgggtggcggcctggag
atgtgcctggcggctgactaccgggtcatgtccagtgccgcgaagatcggcctgccggaa
gtcaagctgggcatctacccaggctttggcggcaccgtgcgcctgccgcgcctgatcggc
tcggacaacgccatcgagtggatcgcctcgggcaaggaaaaccgtgccgaagacgccctt
aaagtcggcgccgtcgatgccgtggtggcccctgagctgctgcaggccggtgccctggac
ctggtcaagcgcgccatcagcggtgagctggactacaaggccaagcgccagcccaagctc
gagaagctcaagctcaacgccatcgaacagatgatggccttcgaaaccgccaagggcttc
gttgctggccaggccggcccgaactacccggctccggtcgaagccatcaaaaccatccag
aaagccgccaactttggccgcgacaaggccctggaagtcgaggccgccggtttcgccaag
ctggccaagacctcggtcgccgaaagcctgatcggcctgttcctcaacgaccaggagctc
aagcgcaaggccaaggcccatgacgagatcgcccacgacgtgaagcaggccgccgtgctc
ggcgccggcatcatgggtggcggcatcgcctaccagtcggcggtcaagggcacgccgatc
ctgatgaaggacatccgcgaggaagccatccagctgggcctgaacgaggcttccaagctg
cttggcaagcgcgtcgagaaggggcgtctgaccccggcgaagatggccgaggcgctcaac
gccattcgtccgaccctgtcctacggtgatttcgccaacgtcgacatcgtcgtcgaggcc
gtggtcgagaacccgaaagtcaagcaggcagtgctggccgaggtggaagggcaggtgaag
gacgacgcgatcctcgcctccaatacctcgaccatctctatcaacctgctggccaaggcg
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtcatccgcggcgagaagtccagcgaagtcgcggtcgcgactaccgttgcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtcgac
ttcgtgcgcatcgacaaggtcatggagaagttcggctggccgatgggcccggcctacctg
atggacgtcgttggcatcgacaccggtcaccacggccgtgacgtgatggccgaaggcttc
ccggaccgcatgaaggacgaccgtcgctccgccgtcgacgccctgtacgaggccaatcgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaggtcgccgacgccagcgtgctcgacgtgctcaagccgatcgtcttcgagcagcgt
gaagtcagcgatgaggacatcatcaactggatgatggtgccgctgtgcctggagaccgtg
cgctgcctcgaagacggcatcgtcgaaaccgccgccgaagccgacatgggtctggtctac
ggcatcggtttccctcccttccgcggtggcgcgctgcgctacatcgattcgatcggggtc
gccgagttcgtcgcactggccgacaagtacgccgacctggggccgctgtaccaccccact
gcgaagctgcgcgaaatggccaagaacggccagcgcttcttcaactga
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