Paracoccus yeei: A6J80_13730
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Entry
A6J80_13730 CDS
T04781
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
pye
Paracoccus yeei
Pathway
pye03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pye00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6J80_13730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pye03019
]
A6J80_13730
03009 Ribosome biogenesis [BR:
pye03009
]
A6J80_13730
Enzymes [BR:
pye01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
A6J80_13730
Messenger RNA biogenesis [BR:
pye03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A6J80_13730
Ribosome biogenesis [BR:
pye03009
]
Prokaryotic type
rRNA processing factors
A6J80_13730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ARC37300
UniProt:
A0A1V0GU31
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All DBs
Position
2283699..2286314
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AA seq
871 aa
AA seq
DB search
MSKKMLIDATHAEETRVVVVDGTKVEEFDFETVNKRQLAGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFAEIHPDYYQIPAADRKALLEEERQAAAAENDEAEKPKRGQRRRKGPKPA
VADAGDAVVSEDIAGMAIVDPTEGDGGPAESFHPEHEAEAIAPDAALPEAASEPAPEEEH
ADEEAAEDDGIESVAEEDVAEEISAPKRQPRARRYKIQEVIKVRQIMLVQVVKEERGNKG
AALTTYLSLAGRYCVLMPNTARGGGISRKITNAADRKKLKEIASELEVPEGAGLIIRTAG
SQRTRTEIRRDYEYLMRLWEQIRELTFKSIAPAPVYEEGDLIKRTIRDIYSKEIEEVLVE
GERGYRTAKDFMKMIMPSHAKNVKHYQDQMPLFARYQVESYLAGMFNPVVQLKSGGYIVI
GVTEALVAIDVNSGRATKEGSIEDTALKTNLEAADEVARQLRLRDLAGLIVIDFIDMEER
RNNAAVEKRFKDKLKTDRARIQVGRISGFGLMEMSRQRLRPGMLESTTQPCAHCHGTGLI
RSDDSMALTILRAIEEEGTRKRSREVLVKAPVAVANFLMNAKREHIAGIETRYGMSVRVE
ADPSLISPDYAIEKFKTATRNVPEVTHPVVSVDARLMAQIDEEDTSEDEDEDLTAEVEDA
AADESGAAGDDAQSEELRGDRDEGGENGKRRRRRRRRRNGRNGEAEGQGGDETDAPEVAE
GEAEAEEQAAPEAAPESDEQGAGSRRRRSRRRKGEQAEVAAEPAAPVDLTDLPIADAQPE
QEAVVAEVAEAEPAPAPEPDAEAVPAEPMAVAVDAPAPVEATPEPMAVEPESAEPEVAES
VEPAAPQPEPEPAMTAEEPSRPKRRGWWSQG
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaaaatgctgatcgacgccacgcatgccgaggaaactcgggttgtcgtggtc
gatggaaccaaagtcgaagagtttgacttcgagacggtcaacaagcggcagcttgcgggc
aacatctatctggccaaggtgacgcgggtcgaaccctcgctgcaggcggccttcgtggat
tacggcggcaaccgccatggcttcctggcctttgccgaaatccacccggattactaccag
atccccgccgccgaccgtaaggcgttgctggaggaagagcgccaggccgccgccgccgag
aatgacgaggccgaaaagcccaagcgtggccagcgccgccgcaaggggcccaagcccgcc
gtcgccgatgcgggcgacgcggtggtgtccgaggacatcgcgggcatggccatcgtcgat
ccgaccgaaggcgacggtgggcctgccgagagcttccaccccgagcacgaggcggaagcc
atcgcacccgatgccgccttgcccgaggctgcgtccgagcccgctcccgaggaggagcac
gccgacgaggaagccgccgaggacgacggcatcgaatccgtcgccgaggaggatgtggcc
gaggagatcagcgcgccgaagcgtcagccccgcgcgcgccgctacaagatccaggaagtc
atcaaggtccggcagatcatgctggtccaggtcgtcaaggaagagcgcggcaacaagggc
gcggccctgaccacctacctgtcgctggccggccgctattgcgtgctgatgcccaacacg
gcgcgcggcggcggcatcagccgcaagatcaccaatgccgccgaccgcaagaagctgaag
gaaatcgcgtccgagctggaggtgccggaaggcgccgggctgatcatccgcaccgccggc
agccagcgcacccggaccgagatccgccgcgactatgaatacctgatgcggctgtgggaa
cagatccgcgaactgaccttcaagtccatcgcccccgcgccggtctatgaggaaggcgac
ctgatcaagcgcacgatccgcgacatctactcgaaggaaatcgaggaggttctggtcgag
ggcgagcgcggctatcgcacggccaaggacttcatgaagatgatcatgccgtcccacgcc
aagaacgtgaagcactaccaggaccagatgccgctgttcgcgcgctaccaggtggaaagc
tatctggcgggcatgttcaacccggtcgtgcagctcaagtcgggcggctacatcgtcatc
ggcgtgaccgaagcgctggtcgccatcgacgtgaactcgggccgggccaccaaggaaggc
tcgatcgaggacacggcgctgaagacgaacctggaggccgccgatgaggtggcgcgccag
ttgcgcctgcgcgacctggccgggctgatcgtcatcgacttcatcgacatggaggagcgg
cgcaacaacgccgccgtcgagaagcgcttcaaggacaagctcaagaccgaccgggcgcgg
atccaggtcggccgcatctcgggctttggcctgatggagatgtcgcgccagcgcctgcgt
ccgggcatgctggaatcgaccacgcagccctgcgcgcattgccacggcaccgggctgatc
cgctcggacgacagcatggcgctgaccatcctgcgcgccatcgaggaagagggcacccgc
aaacggtcgcgcgaagtgctggtcaaggcgccggtcgccgtcgcgaacttcctgatgaac
gccaagcgcgagcatatcgccggcatcgagacgcgctatggcatgtcggtgcgggtcgag
gcggacccgtcgctgatttcgcccgactatgccatcgagaagttcaagaccgcgacgcgg
aacgtgcccgaggtgacgcatcccgtcgtttcggtcgatgcacggctgatggcccagatc
gacgaggaggacacgtccgaggatgaggacgaggacctgaccgccgaagtcgaggatgcc
gcggcggacgagtccggcgctgcgggtgatgacgcccagtccgaggagctgcgcggcgac
cgcgacgagggtggcgagaacggcaaacgtcgtcgccgccgccgtcgccgtcgcaatggc
cgcaatggcgaagccgaagggcaggggggtgacgaaaccgacgcgcccgaggtcgccgag
ggagaagccgaggccgaggagcaggccgcacccgaagcggcgcccgagagcgacgagcag
ggcgccggttcgcgccgccgccggtcgcgccgccgcaagggcgagcaggccgaggttgcc
gcggaacccgccgcgcctgtcgatctgaccgacctgccgattgccgacgcgcagcccgag
caggaggcggtcgtggcagaggttgcggaagctgagcctgcgcccgcgccggaaccggac
gctgaggccgtgcccgccgagccgatggccgtggccgtagatgcgcccgcccccgtcgag
gcgaccccggagccgatggccgtcgagcctgaaagcgcggagcccgaggtagcggaaagc
gtcgagcccgcagcgccgcagcccgagccggaacccgcgatgaccgccgaggagccgtca
cggcccaagcggcgcggctggtggtcgcagggctga
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