Paenibacillus yonginensis: AWM70_04005
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Entry
AWM70_04005 CDS
T04810
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pyg
Paenibacillus yonginensis
Pathway
pyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWM70_04005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyg03019
]
AWM70_04005
03009 Ribosome biogenesis [BR:
pyg03009
]
AWM70_04005
Enzymes [BR:
pyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWM70_04005
Messenger RNA biogenesis [BR:
pyg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWM70_04005
Ribosome biogenesis [BR:
pyg03009
]
Prokaryotic type
rRNA helicases
AWM70_04005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Helicase_RecD
AAA_19
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ANS73837
UniProt:
A0A1B1MXG4
LinkDB
All DBs
Position
868740..870305
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AA seq
521 aa
AA seq
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MSTFSEFGLEPKVLQAITELGFEEATPIQAKSIPFAMEGRDLIGQAQTGTGKTAAFGLPL
INKIPREEERIVALIMAPTRELAIQVAEEIGKLSRFKGIRSLPIYGGQDISRQIRALKKK
PQIIIGTPGRLLDHINRKTIKLDDVQTVILDEADEMLDMGFMEDIQAILKMVPDERQTML
FSATMPPNIQKLAQQFLKNPEHVSVIPKQVSAPLIDQAYIEVNERQKFDALSRLLDMESP
ELAIVFGRTKRRVDELSEALQKRGYSADGLHGDLSQNQRDNVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVVNFDLPQDPESYVHRIGRTGRAGKEGAAYSFVTPREIDHLHFIERVTR
HRIPRKPLPSIAEAIEGKQRITAERLIDIIESGELNEYKGIAIQLLEQYDSVNLLAAAIK
LVTGDKNENAHIELTPEEPIRVKRRKPDIRSSGRKPSGYGNRGGSGSYKRDNRDGRGFGS
GKGGYSKEGGRDYNRSSSSSYDRKPRPSGERRPYNRSEENN
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacattctcagaattcggccttgagccaaaggtattgcaagccattacggaactt
ggttttgaagaagctacgcccatccaggccaaatccattccgtttgcaatggaaggcaga
gacctgatcggccaagcacaaacaggtacaggcaagacagcagcatttggtcttccttta
attaacaagattccaagggaagaggaacgtatcgttgcgttgattatggctcctactcgt
gagcttgccattcaggttgccgaagaaatcggcaaattgtcgcgtttcaaaggcatccgt
tccttgccgatctacggcggacaagatatttcccgtcagattcgcgcattgaagaagaaa
ccgcaaatcattatcggtaccccaggacgtttgctggaccatatcaatcgtaaaaccatc
aagctggacgacgtgcaaactgttatccttgatgaagcggatgaaatgctggacatgggc
tttatggaagacattcaggcgatcctgaaaatggttcctgacgagcgccaaacaatgtta
ttctctgctacaatgcctccgaatatccaaaagctggcacaacaatttttgaaaaatccg
gagcatgtttccgtgattcctaaacaagtcagcgctccattgatcgaccaagcctacatt
gaagtgaacgaacgtcagaagttcgacgctttgtcccgcctgctcgacatggaatcccct
gagctggctatcgtcttcggccgtacgaaacgccgggttgacgaactctccgaagctttg
cagaagcgtggttactcggctgacggcctgcatggcgacttgtcccagaaccagcgtgat
aacgttatgcgcaaattccgcgacggcagcattgacgtccttgttgcgactgacgttgcg
gcccgcggtctcgatgtttccggcgttactcacgtcgttaactttgaccttccgcaggat
ccggaaagttatgttcaccgtatcggccgtacaggtcgtgccggcaaagaaggcgctgct
tattccttcgtaacgcctcgcgagatcgatcatctgcatttcattgaacgggtaacgcgc
caccgcattccgcgcaaacctttgccaagcattgccgaggcgattgaaggcaaacagcgc
attacggcggagcgtttgattgatatcatcgaaagcggagagctgaacgaatacaaaggc
atcgcgattcaactgctggagcagtatgattccgtgaacttgcttgcagcagccatcaaa
ttggtgactggcgacaagaacgagaacgcccatatcgaattgactccggaagagccaatt
cgcgtgaaacgccgcaaaccggatatccgttccagcggacgcaagccttccggctacggc
aatcgcggaggcagcggctcctacaaacgggacaaccgtgacggacgcggcttcggcagc
ggcaaaggcggatacagcaaggaaggcggacgtgactacaaccgttcctcttcttcctcc
tatgaccgcaaacctcgtccaagcggcgaacgccgtccgtacaaccgcagtgaagagaat
aactaa
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