Pseudomonas yamanorum: AK972_1111
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Entry
AK972_1111 CDS
T05821
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AK972_1111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pym03400
]
AK972_1111
Enzymes [BR:
pym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AK972_1111
DNA repair and recombination proteins [BR:
pym03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AK972_1111
RecFOR pathway proteins
AK972_1111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_16
Mg_chelatase
AAA_3
TIP49
AAA_14
nSTAND3
AAA_17
RNA_helicase
AAA_2
Rad17
AAA_28
AAA_18
NTPase_1
NB-ARC
AAA_24
TsaE
ABC_tran
T2SSE
AAA_19
RsgA_GTPase
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AMW81911
LinkDB
All DBs
Position
1191752..1192810
Genome browser
AA seq
352 aa
AA seq
DB search
MIEADRLIAATGPRDREEVQDRAIRPLSLAEYIGQPTVREQMELFIQAARGRSESLDHTL
IFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRLS
PIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQ
RLEFYSTADLATIVSRSATILGLPLDPEGAFEIARRARGTPRIANRLLRRVRDFAEVRAK
GHITKPVADLALNLLDVDEHGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIED
VLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPSRLGEMPVVDEFLDAVDD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaagctgatcgtctgatcgcggccaccggcccccgtgaccgtgaagaagtccag
gaccgggcgattcgccccctgagccttgccgaatacatcggccagcccaccgtgcgcgag
cagatggagctgtttatccaggctgcgcgcgggcgcagcgagtccctggatcacacgttg
atcttcggcccgccgggcttgggcaagaccaccctggccaacatcatcgcccaggaaatg
ggcgtgtcgatcaagtccacctccggccctgtgctggagcgtccgggtgacctggcggcg
ctgctgaccaatctggagccccacgacgtactgtttatcgacgagatccaccggctttcg
cccatcgtcgaggaagtgttgtacccggccatggaagacttccagttggacatcatgatc
ggcgaaggcccggccgcgcgctcgatcaagctcgacctgccaccgttcaccctggtgggg
gccaccacccgtgcgggcatgctgaccaatccgctgcgagaccgtttcgggattgttcaa
cgtctagagttctatagcacggcggatctggccaccatcgtcagccgttcggcgactatc
ctcggcttgcccctggacccggaaggcgcgtttgaaatcgcccgccgcgcccgtggtacg
ccgcggattgccaaccggttgctgcgtcgggtgcgcgattttgccgaagtacgcgccaaa
gggcatatcaccaagcccgtggcagacctggcgctgaacctgctggatgtggatgaacac
ggctttgaccaccaggatcggcgcctgctgttgaccatgatcgagaaattcgacggcggc
ccggtgggcgtggacagcctcgcggcagccatcagcgaagagcggcatacgattgaggat
gtgctggagccgtatctgattcagcagggctacatcatgcgtacaccgagggggcgcgtg
gtcacccggcatgcgtatctgcactttgggttaaacattccgtcacgattgggcgagatg
cccgtagtagacgaattccttgatgcagtagacgattaa
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