KEGG   Pseudomonas yamanorum: AK972_3733
Entry
AK972_3733        CDS       T05821                                 
Name
(GenBank) General secretion pathway protein D
  KO
K02453  general secretion pathway protein D
Organism
pym  Pseudomonas yamanorum
Pathway
pym03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pym00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AK972_3733
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pym02044]
    AK972_3733
Secretion system [BR:pym02044]
 Type II secretion system
  General secretion pathway protein
   AK972_3733
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 DUF5976 CARDB
Other DBs
NCBI-ProteinID: AMW84533
LinkDB
Position
complement(4130648..4132861)
AA seq 737 aa
MIDTSPRALRTTVFCLATTVALGGCGSFPDHLDPDDALLHEAMQGTGSQRPPEDPASESP
AAHSRQPQTPTPPQRQLIRGNQQFVRQPAPAPAVKDEASGDIVFNFADQPIEAVINSVMG
DLLHENYSIAQGVKGNVSFSTSKPVNKKQALSILETLLSWTDNAMIRQGQRYVILPANQA
VAGKLVPEMSVSQPSSGLSARLFPLRYISATEMQKLLKPFARENAFLLVDPARNVLSLAG
TPDELANYQDTIDTFDVDWLKGMSVGVFGLQRASVAELMPELQKMFGPDSGMPLAGMVRF
LPIERTNSVVAISSQPQYLSEVGDWIHTIDEGGGNEPQMYVYDVRNMKATDLAKYLRQIY
GTGAIKDDTPAKVAPGLRTATLSSLNTSGGTSGGLNNSGNNPPVSDDEDQAPAASEDSES
TEQGAAEGTTGKSLDAGTRITAQKSSNQLLVRTRPVQWKEIESAIKRLDNPPLQVQIETR
ILEVKLTGELDLGVQWYLGRLAGNSTSTTVANTPGSQGALGGGGAGLGADSLFYSFVSSN
LQVALHALETNGRTQVLSAPSLVVMNNQPAQIQVGDNIPISQTTVNTGNADSTLSSVEYV
QTGVILDVVPRINPGGLVYMDIQQQVSDAENQTTNSSDTPNNPRISTRSVSTQVAVQSGQ
TVLLGGLIKQDNAESVSAVPYLGKIPGLRWLFGNTSKSKDRTELIVLITPRVITSSGQAR
QVTDDYRQQMQLLRPAN
NT seq 2214 nt   +upstreamnt  +downstreamnt
ttgatcgatacttcccctcgcgccttgcgcaccaccgtgttttgcctggccaccaccgtc
gccctgggcggctgtgggtcattccccgatcacctcgacccggacgatgccttgcttcac
gaggcgatgcagggcaccggttcgcaacgcccgcccgaggacccggccagcgagtcgcct
gctgctcacagtcgccaaccccagacgcccacgccgccccagcgccagttgattcgcggt
aaccagcagttcgtgcgccagcccgcaccggcgcctgcggtcaaggatgaagccagtggc
gacatcgtgttcaacttcgccgaccagccgattgaagcggtgatcaacagcgtcatgggc
gacctgttgcacgagaactacagcatcgcccagggcgtgaaaggcaacgtaagcttttcc
acctcaaagccggtgaacaagaaacaggcgctgtcgatcctcgagaccctgctgtcctgg
accgacaacgcgatgatccgccagggccagcgctacgtgatcctgcccgccaaccaggcg
gtggcgggcaagctggtgccggaaatgagcgtgtcgcaaccctccagcgggctctcggcg
cggctgtttccgttgcgctatatctcggccacggaaatgcagaaactgctcaagccgttc
gcccgggaaaatgcgttcctgctggtggacccggcgcgtaacgtgctgagcctggccggt
acgccggatgagctggccaactatcaggacaccatcgacacctttgatgtcgactggctc
aagggcatgtcggtgggcgtattcggtttgcaacgggcttcggtcgcggagttgatgccc
gagctgcaaaagatgttcggccccgacagcggcatgcctttggcgggcatggtgcgcttc
ctgcccattgagcggaccaattcggtggtggcgatctcgtcccagccgcagtacctcagc
gaagtcggcgactggattcacaccatcgacgaaggtggcggcaacgagccgcagatgtac
gtctacgacgtgcgcaacatgaaggccacggacctcgccaaatacctgcggcagatctac
ggcaccggcgcgatcaaggacgatacgccggccaaggtggcgccgggtctgcgcacggcg
accttgtcatcactcaacaccagcggcggcacctcgggtggcctgaacaacagtggcaat
aacccgcccgtcagcgacgacgaagaccaggccccggccgccagcgaagacagtgaaagc
acggagcagggcgctgccgaaggcacgaccggcaaaagcctcgacgccggcacccggatc
accgcgcaaaaaagcagtaaccagttgctggtacgcacccgcccggtacagtggaaggag
atcgaatcggcgatcaagcgcctcgacaacccgccgctgcaagtgcagatcgagacgcgc
attctcgaagtcaaactcaccggcgaactggacctcggggtgcaatggtacctgggccgc
ctggcgggcaattccaccagcaccacggtggccaatacccccggcagccagggcgccctg
ggtggtggcggtgcgggattgggcgcggattcgctgttctattccttcgtcagctccaac
ctgcaagtggccttgcacgccctggaaaccaacggccgcacccaggtgctgtcggcgccg
tcgctggtggtgatgaacaaccagccggcgcagatccaggtgggtgacaacatccccatc
agtcagaccacggtcaacaccggcaacgccgacagcaccttgagcagcgtcgaatacgtg
cagaccggggtgatcctcgacgtggtgccgcgcatcaacccgggcggcctggtgtacatg
gacatccagcaacaggtcagcgacgccgagaaccaaaccaccaacagcagtgacacgccc
aacaacccgcgcatctccacacgttcggtgtccacccaggtggcggtgcaaagcggccag
accgtgttgctcggcgggctgatcaagcaggacaacgccgagagcgtcagtgcggtgccg
tacctggggaaaatccccgggctgcgctggttgtttggcaacaccagcaagtccaaggat
cgcaccgaactgatcgtgctgatcaccccccgggtgattaccagcagcggccaggcgcgg
caggtgacggatgactatcgccagcagatgcagctgttgcgcccggcgaactag

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