Pseudomonas yamanorum: AK972_5149
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Entry
AK972_5149 CDS
T05821
Name
(GenBank) Transcription termination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pym03021
]
AK972_5149
03009 Ribosome biogenesis [BR:
pym03009
]
AK972_5149
Transcription machinery [BR:
pym03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AK972_5149
Ribosome biogenesis [BR:
pym03009
]
Prokaryotic type
rRNA transcription factors
AK972_5149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
RNA_pol_A_CTD
DUF2187
Motif
Other DBs
NCBI-ProteinID:
AMW85949
LinkDB
All DBs
Position
complement(5675497..5676978)
Genome browser
AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPANVIFEALELALATATKKRFEDEVDLRVEINRHTGAYETFR
RWTVVEEADLDDPAIETWPSKVAETHPGAQVGDVVEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRN
FIDELEVDEDLAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDTVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLLDIDGIDDDRA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgagtcggtatccaatgaaaagggcgtaccggca
aacgtgatttttgaagcgctggagctggctctggccactgctaccaaaaagcgttttgaa
gacgaagttgatctgcgtgtggaaatcaaccgccacaccggtgcctacgagactttccgt
cgctggacggtcgtcgaagaagccgatcttgatgatccggccatcgaaacctggccgagc
aaggttgctgaaacgcatccgggtgcccaggtcggtgatgtcgttgaagaaaagatcgaa
tccatcgagttcggccgcatcgctgcacagactgccaagcaagtcatcgtgcagaaggtc
cgcgaagccgagcgcgctcaagtcgttgacgcttatcgcgagcgcctgggggaaatcatc
tccggcaccgtgaaaaaagtcacccgcgacaacgtgatcgtcgacctgggtaacaacgct
gaagcgttgctggcccgcgaagacatcatttcccgcgaaactttccgggttggtgtgcgc
ttgcgtgcattgctcaaggaaatccgcaccgagaaccgcggccctcagttgatcctgtcg
cgtaccgcgccggaaatgctgatcgagttgttccgcatcgaagtgccggaaattgccgaa
ggcctgatcgaagtcatggctgcgtcccgcgatccgggttcgcgcgccaagatcgcggtc
cgctccaaggacaaacgcatcgacccgcaaggcgcttgcattggtatgcgcggttcgcgc
gtccaggcagtgtcgggcgaattgggcggtgagcgtgtggacatcgtcctgtgggacgat
aacccggcgcagttcgtgatcaacgcaatgtcgcctgctgaagtggcggcaattatcgtt
gacgaggatgcccatgcaatggatatcgccgtcggcgcagacaatctggctcaggccatc
ggtcgcggtggtcagaacgtacgtttggccagccagttgaccggctggaccctgaacgtg
atgaccgaatcggacatccaggctaagcagcaagcagaaaccggtgacatcctgcgcaac
ttcatcgacgagctggaagtcgacgaagacctggcgcaggtgctggtagatgaaggcttc
accagcctggaagagattgcctacgtaccgttggaagaaatgctcaacatcgacggcttt
gacgaagacaccgtcaacgagcttcgcgctcgggccaaggatcgtttgttgactaaagcc
atcgctactgaggaaaagctggcagacgcccatccggccgaagacctgctctcgcttgag
ggtatggacaaggatttggcgatggaactggcggtgcgcggcgtaattacccgcgaagac
ctggccgagcagtctattgacgacctgctcgacatcgacggcattgacgatgatcgtgcc
ggcaagttgatcatggccgcccgagcccattggttcgagtaa
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