Quercus suber (cork oak): 111996144
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Entry
111996144 CDS
T05868
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00040
Pentose and glucuronate interconversions
qsu01100
Metabolic pathways
Module
qsu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111996144
Enzymes [BR:
qsu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111996144
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
111996144
NCBI-ProteinID:
XP_023883866
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All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MAQQIRYLLPFFSFMLSFISCYSTLQKDPLRHFGEESRFKDVINQSTHVLRLKRFDRILG
TISTSGKAINVNDYGAKGDGTDDTEAFQKAWEVACSTQGAVLVVPQKTYRLKPIRFSGPC
KSDLKVQISGTLEASNDRTDYSQDGRHWLLFDSVQNLIVEGGGTINGNGKIWWQNSCKVN
KALPCTSAPTALTFFECKYLTVNNLKIQEAQQIHTSFEKCMNVQASLLTITAPEDSPNTD
GIHVADTQDIQISSCNIGTGDDCISIASGSQNVQARDITCGPGHGISIGSLGSGNSESYV
SGVTINGAKLYGTTNGVRIKTWQGGSGSASNIKFQNVEMHNVANPIIIDQNYCDQDKPCS
EQKSAVQVKNVLYQNIYGTSASDVAIEFNCSNRFPCQEILLQSINLEAEKGEKTEALCNN
VQSTDTGIVSPHCP
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcaaataagatatcttcttccatttttctctttcatgctctcttttatttca
tgttatagcactttgcaaaaggacccacttcgtcattttggggaagaatctaggtttaag
gacgtgatcaatcaaagcactcatgtcttacgtttgaaaaggtttgatagaatattgggt
accatttctacctcgggtaaagcaattaatgtcaatgactatggagctaaaggtgatggt
actgatgacacagaggcatttcagaaggcttgggaggtagcttgttcaacccaaggagct
gttctcgtggtgcctcagaaaacctatcgtcttaagccaattagattctcaggtccttgt
aaatctgatcttaaagtgcagatttctggaaccttggaagcatctaatgatcgaacggac
tacagccaagatggtagacactggctactcttcgatagtgttcaaaatttaatagttgaa
ggtggtggaaccatcaatggcaacgggaagatatggtggcaaaactcttgcaaagtcaat
aaagctctgccttgcacgtctgcaccaacggctctgaccttctttgagtgtaagtatttg
actgtgaataatttgaagatccaagaagcgcaacaaattcacacctcttttgaaaaatgc
atgaatgttcaagcttctttgttgactataactgctccagaggatagccccaatactgat
ggaattcatgtcgctgacactcaagacatccaaatttcaagctgtaatataggaacaggt
gatgattgtatttcaattgcaagtggatcccagaacgtgcaagccagagacataacctgt
ggaccgggtcatggaattagtattggaagcttaggatctggaaattcggaatcttatgtt
tctggagtaaccataaatggagctaagttgtatggaaccacaaatggtgtgaggattaag
acatggcagggagggtcaggaagtgcaagcaacatcaaatttcagaatgttgaaatgcat
aatgttgccaaccctataataatagaccaaaattactgtgaccaagacaaaccatgcagc
gaacagaaatctgcagttcaggtgaaaaatgtgctttaccaaaacatttatgggactagc
gcttctgatgttgccattgaattcaactgcagcaatagatttccatgtcaggagattttg
ttgcaaagcattaacttggaagctgaaaaaggggaaaaaacggaagctttatgcaataat
gtgcaatcgactgacacaggaattgtttccccacactgcccttga
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