Quercus suber (cork oak): 112038202
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Entry
112038202 CDS
T05868
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00040
Pentose and glucuronate interconversions
qsu01100
Metabolic pathways
Module
qsu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112038202
Enzymes [BR:
qsu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
112038202
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112038202
NCBI-ProteinID:
XP_023926776
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MSQQSQFLTLLIILASFSTCFSSYKEDPHATNGGPDPIAHTTSMGTINQGDKHEPWLVDF
MKSQTKRFGLTTRLSSASTSQKLVNVDDFGAKANGGDDTEAFRKAWKVACSSANSALVVP
ANKNYHLKPITFSGPCKPYFTMKVYGTIKASSHKSDYEEDTLHWLVFENLQDFNIEGGGT
INGNGRIWWESSCKINDKLPCKHAPTAVTFQDSKNVRVSSIRIKNAQQMHLTFQNCQNVE
ALNLVVIAPGNSPNTDGIHVTGTQNIQIQNCVIRTGDDCISIVSGSKNVQATDITCGPGH
GISIGSLGSDNSEAEVSNVMVNRAKLTGTTNGMRIKTWQGGSGYAKNIIFQNVVMNNVSN
PIIIDQNYCDQKTPCEQQPSAVKISNVVFKNIKGTSASEEAISFDCSKSFPCQGVLLQDV
NLVRQGNGDVDATCLKVRLQKKGNVSPGC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaacaaagccaatttcttacacttctcataatcttagcctctttctcaacctgc
tttagcagttacaaagaggacccacatgctactaatggaggtcctgatcctatagcccac
actacatcaatgggcactatcaaccagggtgataaacatgagccatggcttgtagacttc
atgaagtctcagaccaaaaggtttggtctcacaacaaggcttagcagcgcaagcacttca
cagaagctggttaatgtagatgactttggagctaaagctaatggtggagatgatactgag
gcatttaggaaagcttggaaggtggcttgttcttcagcaaatagcgctcttgtggttcct
gcaaataagaactatcatcttaagccaattaccttctcaggtccttgcaaaccatacttt
acaatgaaggtctatggaacaattaaagcttcttctcacaaatcagattatgaagaagat
acactgcattggcttgtgtttgagaatcttcaagatttcaacattgaaggtggcggcacc
atcaatggcaatgggaggatatggtgggaaagctcatgcaagatcaacgataaacttccc
tgcaagcatgcaccaactgctgtgactttccaagatagcaagaatgtgagggtgtccagc
ataaggataaaaaatgcacagcaaatgcatcttacgtttcagaattgtcaaaatgtcgaa
gctttgaatcttgtggtgattgcaccaggcaatagccccaataccgatggaattcatgtc
acaggaacacaaaacattcaaatacagaactgtgtcatcaggacaggtgatgactgtatt
tcaattgtaagtgggtctaaaaatgttcaagccacggatattacctgtggaccaggacat
ggaatcagcattggtagcttaggatctgataattcagaagcagaagtttctaatgtcatg
gtgaatagagcaaaactcacaggaaccacaaatgggatgagaataaaaacttggcaggga
ggctctgggtatgcaaaaaacatcatatttcaaaatgtggttatgaacaatgtcagcaat
cctataatcatagaccaaaactattgtgatcaaaaaacaccatgcgaacaacagccctca
gctgtgaaaataagcaatgtggttttcaagaacatcaagggcactagtgcatcagaagag
gccatatcattcgattgcagcaagagctttccttgtcaaggggttttgttgcaagatgtt
aatctggtacgccaaggcaatggagatgtcgatgctacttgtctgaaagttcgattgcaa
aaaaaggggaatgtctctccagggtgctga
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