KEGG   Rahnella aceris ZF458: JHW33_24635
Entry
JHW33_24635       CDS       T07163                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
race  Rahnella aceris ZF458
Brite
KEGG Orthology (KO) [BR:race00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:race02044]
    JHW33_24635 (tssC)
Secretion system [BR:race02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JHW33_24635 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QQN37994
LinkDB
Position
pPlas2:complement(264674..266155)
AA seq 493 aa
MSDIQVMNASAQAEQSGDYLDQIIDNTQAIRRESDRNKVKSQLDNFLSEVASGAVIVSND
LVGSIEARIAAIDELLSSQVSKIIQAPEFQRMESSWRGLHKLVQSSVTENTKVRVFNCTK
KELLRDFKSASDFDQSSLFKSIYESEYGTFGGDPYSAFVGDFEFDCMPEDVQLLEQISHV
AAAAHAPFLSAANPGMFAMGSFSEMPRPRDLGKLFETSDYARWKSFRQSDDSRYVGLTLP
RVIGRLPYGAKTVSVDAFNFEEKIDENNEGASYLWVNAAYDLAGRMVEAFEEHGWCAAIR
GVEGGGLVKSLPTYNYISQTGEKVMQCPTEVAISDRREKELAELGFIPLIYCKGTDYAAF
FAVQSTNKPRKYDSELANANAKLSSQLQYIMTTSRFAHYLKSIVRDKVGSFMSKSECQNF
LQNWINQYVVGSDNVGPTIKASHPLREAVVEVVDVPGSPGSYRAVAYLKPHFQLEGLSMS
LRLVAELPASTGA
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgagcgatatccaggtcatgaatgcttcagctcaagctgagcagtccggtgattatctc
gatcagattatcgataatacccaggccatccgccgggaatccgatcgtaataaagtaaaa
agccagttggataacttcctgtcggaagtggcatcaggtgcggtcattgtttccaatgat
ctggtgggtagcatcgaagcacgcattgccgccatcgatgaactgctgtcttctcaggtc
agcaaaattattcaggcacctgaattccagcgtatggaatcttcctggcgtggtttgcac
aaactggtgcaaagcagcgtcacggaaaacaccaaagtgcgtgtctttaactgcacgaag
aaagagctgctgcgtgattttaaatccgcctctgactttgatcagtcttcattattcaaa
agcatttatgaaagcgaatacggtacctttggcggtgacccttactctgcttttgtgggt
gattttgaattcgactgtatgccggaagatgtgcaactgctggaacagatttcacatgtt
gccgccgccgcccacgcgccattcctgagtgctgcgaaccctggcatgtttgcgatggga
tcgttctccgaaatgccgcgtccgcgtgatctgggcaaactgtttgaaacctctgactac
gcccgctggaaatccttccgtcagagtgacgactcacgttatgtcggcttaacgctgcca
cgtgttatcggccgtctgccttacggtgcaaaaactgtatccgtagacgcgtttaatttc
gaagaaaaaattgatgaaaataatgaaggagccagctatttatgggtcaacgcggcttat
gatttagcgggccgtatggtcgaggcgtttgaggaacacggctggtgtgcggcgatccgt
ggtgttgaaggcggcggtttggtgaagtcactgccgacctacaattacatttcgcagacc
ggcgaaaaggtcatgcaatgcccgacagaagtggcaatttctgaccgtcgcgaaaaagag
ttagctgagcttggttttattccgctcatttattgcaaaggtacagattacgcggcgttc
ttcgctgtgcagtcgaccaataaaccgcgtaaatacgattctgagctggcgaatgctaac
gccaaattgtcaagtcagttgcaatatattatgacaacgtcgcgctttgctcattatcta
aaatccatcgtgcgcgataaagtgggcagcttcatgtccaaatctgaatgccagaatttc
ctgcagaactggatcaaccaatatgttgtgggttcagataatgtaggaccaacgattaaa
gcaagccatccgttacgtgaggctgtggtcgaagttgttgatgtaccaggttctccgggc
agttatcgcgccgttgcgtatttaaaaccgcatttccagcttgaaggactcagcatgtcg
ctgcgtctggtagcggaacttcctgcatcgacgggtgcataa

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