Raineyella fluvialis: Rai3103_15790
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Entry
Rai3103_15790 CDS
T06259
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
rain
Raineyella fluvialis
Brite
KEGG Orthology (KO) [BR:
rain00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rain03019
]
Rai3103_15790
Enzymes [BR:
rain01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Rai3103_15790
Messenger RNA biogenesis [BR:
rain03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Rai3103_15790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
MTR4-like_stalk
AAA_22
Phosphonate-bd
GCP5-Mod21_N
Motif
Other DBs
NCBI-ProteinID:
QGF24843
UniProt:
A0A5Q2FI45
LinkDB
All DBs
Position
complement(3432881..3435742)
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AA seq
953 aa
AA seq
DB search
MASAEELSPAEAYARFRHHQAFPELRDFANGYGFDFDEYQVEACQAVEGGSGVLVAAPTG
AGKTIVGEFAVHLALAQGRKAFYTTPIKALSNQKYNDLCERHGSDRVGLLTGDSSINSEA
PVVVMTTEVLRNMMYAGSPTLRGLGFVVMDEVHYLADRFRGPVWEEIIIGLPDSVQLVCL
SATVSNAEEFGGWLAEVRGEMEVVVSERRPVPLYQHVMVGNRLMDLFADVAPTADLEDRA
ATYDVNPALVRIAKEESRVVRDDSRRPRGRSGKGKRTSGTAQYGGGAAREHQERSRYRPA
HRAEVVRVLERADLLPAIVFIFSRQGCDAAVRQLQAAHVHLTAPDEEAAILAIAQRHVQG
FSPEDLQALGYELFLDGLLRGVAAHHAGVLPALKECIEECFEAGLIKVVFATETLALGIN
MPARSVVIEKLVKYNGEAHVDITPGEYTQLTGRAGRRRIDVEGHAVVIWQPGMDPRAVAG
LASRRTYPLRSAFRPTYNMAVNMLNRMPRSQVRTVLELSFAQFQTDRSVVGLARRLARTT
GDHDDLAAQAACDRGDFMEYARLREEIHLIETTAVKQDKAFRREETERLLTGLRPGDVLR
VPSGRSQGWVVVLDNGHIDPQQGPRPTVMTVDRQVRRLSLTDFPSLPQVAGKVRVPKHFQ
SRDPSHRHSLAAALRQRLDQLDPTPQRTRTEGSLNDKERARIAELRDQLATHPCHTCPDR
EVHARWAEKALRAEKEARQLEHQVARRTRSIADRFDKICTVLGSLDYVRAAGTDDLEVTK
EGRTLAQIYSEDDLVVAECIRDGAFDGLSAPQLAAVLSVFTYEPRKGDEHRSQRMPDLVT
HEAYENVGRIARRIALVERDARLESGVELPPGFAQPAFDWCAGRPLAEVLGRGEMSAGDF
VRWARLVIDLTDQVATAAGPGDLRDTCHEVRHRMQRGVVDAAISAPEDEDWDG
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagctgaggagctttccccggccgaggcgtacgcccgcttccggcaccaccag
gccttccccgaactcagggatttcgcgaacgggtacggcttcgatttcgacgagtaccag
gtcgaggcctgccaggccgtcgaggggggatccggcgtcctggtcgccgcccccaccggg
gccggcaagacgatcgtcggcgagttcgcggtccatctcgccctcgcccaggggcgcaag
gccttctacacgaccccgatcaaggcgctgtccaaccagaagtacaacgacctgtgcgag
cggcatggctccgaccgggtcggcttgctgaccggtgactcctcgatcaactccgaggca
ccggtggtcgtgatgaccaccgaggtgctccgcaacatgatgtacgccgggtcgcccacg
ctgcgcggcctgggcttcgtggtgatggacgaggtgcactacctcgccgaccggttccgt
ggcccggtctgggaagagatcatcatcggactgccggattcggtccagctcgtctgtctg
tccgccacggtgtccaatgccgaggagttcggcggctggctcgccgaggtccggggggag
atggaggtcgtcgtctccgagcgtcgcccggtgcccctctaccagcacgtcatggtgggg
aaccggctgatggacctcttcgcggatgtggcgccgaccgcggacctggaggaccgggcc
gccacctacgacgtcaacccggccctcgtacggatcgccaaggaggagtcccgcgtcgtc
cgggacgactcgcggcgcccgcggggcagatccggcaagggcaagcggacttccggcacg
gctcagtacggcggcggcgccgcccgcgagcaccaggaacgctcccgctaccggccggcc
caccgagccgaagtcgtccgggtcctggaacgggcggacctgttgcccgcgatcgtcttc
atcttctcgcgacagggctgtgacgccgccgtccggcaactccaggcggcgcacgtgcac
ctcaccgcgcccgacgaggaggcggcgatcctcgccatcgcgcagcgccacgtccaggga
ttcagtcccgaggacctgcaggcgctcggctacgaactcttcctcgacggattgctgcgc
ggtgtcgccgcccaccacgcgggcgtcctgccggcactcaaggaatgcatcgaggagtgc
ttcgaggcagggttgatcaaggtggtcttcgccaccgagacgctcgcgctcggcatcaac
atgcccgcccggtcggtggtcatcgagaagctggtcaagtacaacggcgaggcccacgtc
gacatcacgccgggggagtacacccagctgaccggccgcgccgggcgccgccgcatcgac
gtcgagggccatgccgtggtgatctggcagccgggcatggacccccgcgccgtcgccggc
ctggcgagccggcggacctacccgctgcgctcggcgttccggccgacgtacaacatggcc
gtcaacatgctcaaccggatgccgcgctcccaggtgcgtacggtcctggagctgtcgttc
gcccagttccagaccgaccggtccgtcgtcggcctcgcccgccgactggctcgcaccacc
ggcgaccacgacgacctcgcagcccaggccgcctgcgatcggggcgacttcatggagtac
gcccgcctgcgcgaggagatccacctgatcgagaccaccgccgtcaagcaggacaaggcg
ttccgccgcgaggagaccgagcggctgctcaccggcctgcgtcccggcgacgtcctccgg
gtccccagcggccgctcgcagggatgggtcgtcgtcctcgacaacggccacatcgacccg
cagcaggggccgcgcccgaccgtcatgaccgtggaccggcaggtgcgccggctctcgctg
accgacttcccgtccctcccgcaggtggccggcaaggtacgcgtcccgaagcacttccag
tcccgggacccttcgcaccgccacagcctggcggccgccctgcgccagcgactcgaccag
ttggacccgaccccacagcggacccggaccgagggatcgctgaacgacaaggagcgggct
cggatcgcggagctgcgcgaccaactcgccacgcacccctgccacacctgtcccgaccgt
gaggtgcacgcccgctgggccgagaaggcactcagggcggagaaggaggcgcgccagctc
gagcaccaggtcgcccgccgcacccgttccatcgccgatcgtttcgacaagatctgtacc
gtcctgggttccctcgactatgtccgggccgccggcaccgacgacctcgaggtgaccaag
gagggccgcacgctggcccagatctactccgaggacgatctggtggtggctgaatgcatc
cgcgacggcgccttcgacggcctcagcgccccccagctggccgcagtgctctcggtcttc
acctacgagccgcgcaagggcgacgagcaccgctcgcagcggatgccggacctggtgacc
cacgaggcgtacgagaacgtgggccggatcgcccggcggatcgcgctggtggagcgggac
gcccggctggagtccggtgtcgagctgccgccggggttcgctcagccggccttcgactgg
tgcgcgggccgcccgctggccgaggtcctcggccgtggcgagatgagcgccggggacttc
gtccgctgggcccgactggtgatcgacctgaccgaccaggtcgcgacggccgcaggccca
ggcgacctccgcgacacctgccacgaggtgcgccaccggatgcagcgcggggtcgtcgat
gcggcgatctcggcacccgaggacgaggactgggacggctag
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