Rothia aeria: RA11412_1251
Help
Entry
RA11412_1251 CDS
T05268
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
raj
Rothia aeria
Pathway
raj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
raj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RA11412_1251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
raj03019
]
RA11412_1251
03016 Transfer RNA biogenesis [BR:
raj03016
]
RA11412_1251
Enzymes [BR:
raj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RA11412_1251
Messenger RNA biogenesis [BR:
raj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RA11412_1251
Transfer RNA biogenesis [BR:
raj03016
]
Prokaryotic type
tRNA degradation factors
RA11412_1251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
KhpA-B_KH
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
BAV87550
UniProt:
A0A2Z5QZ31
LinkDB
All DBs
Position
1144243..1146456
Genome browser
AA seq
737 aa
AA seq
DB search
MEGPEIQFSEVEIDNGVYGKRHVRFETGRLAKQAAGSVLVTIDDETTLLSATAVGKSPRE
GFDFFPLTVDVEERMYAAGKIPGSFFRREGRPATEAVLAARLIDRPLRPAFTKGIRNEVQ
VVVTVLTVEPDEIYNTFAINAASASTSLSGAPFTGPIGGVRMALIDGQWVCFPKYSQLEN
AVFDMAVAGRIVTKADGSEDVAIMMVEAEATDNSWKLIKEDGHTAPTEEIVAEGLEAAKP
FIAALCKAQADLVERAGKPALELPYFGGHGEDVDTAVKDFAGKRLVEVYSIAGKQEREAA
AAELESELMEALTGEGKEFEERANEVSVAFAALTKHTVRQRILTEQVRIDGRGLTDIRQL
TAEVEVLPRVHGSAIFERGETQIMGVTTLNMLKLEQQLDSLHPVKSKRYIHHYNFPPYST
GETGRVGSPKRREIGHGALAERALTPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCAST
LSLLNAGVPLRAPVAGIAMGLVSDEVDGETRYAALTDILGAEDALGDMDFKVAGTSEFVT
AIQLDTKLDGIPASVLAGALTQAREARLHILEVLTAAIDAPDEMSEFAPRIISVKVPVAK
IGEVIGPKGKTINQIQEDTGADISIEDDGTVFIGATDGPSAEAARTAINAIANPQVPEMG
ERYLGTVVKLTDFGAFISLTPGKDGLMHISEMRKLNGGKRVVDTEDVLSVGQKVQVEITK
IDDRGKLSLSPVVDDAQ
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtggaaggtcccgaaatccaattttccgaggtcgaaatcgacaacggtgtgtacggtaaa
cgtcatgtgcgttttgaaactggccgcctcgccaagcaggcggcgggctccgtgcttgtc
accattgacgacgaaaccaccctgctctctgcaaccgctgtggggaagtcaccgcgtgaa
ggctttgacttcttcccgctgactgtggatgttgaagagcgcatgtatgctgccggtaag
attcccggctcgttcttccgccgtgaagggcgccccgcaactgaggccgtgctcgctgca
cgtctgattgaccgcccgctgcgccccgcctttaccaagggtatccgcaatgaggtgcag
gttgtcgtaaccgttctgaccgttgaaccggacgaaatctacaacaccttcgccattaac
gctgcttccgcctcaacctcgctttcgggcgcaccgtttaccgggcctatcggcggtgtg
cgtatggctcttattgacgggcagtgggtgtgcttccccaagtactctcagctggaaaac
gccgtattcgatatggctgtggccggtcgcatcgtgaccaaggccgacggcagcgaagac
gttgcgatcatgatggtagaggcagaggcaaccgataactcctggaagctcattaaggaa
gacggccatactgcccccaccgaagagatcgtagccgaaggtttggaggctgcgaagccc
tttattgctgctctgtgcaaggctcaggctgaccttgtggagcgcgccggtaaacccgcc
ctggagcttccctacttcggcggacacggtgaagacgttgataccgccgtgaaagacttc
gcgggcaagcgcctcgtggaggtttactccatcgcgggtaagcaggagcgtgaagccgct
gccgcggagcttgaatccgagctgatggaagccctcaccggggaaggcaaagagtttgag
gagcgcgctaacgaggtttcagtagcgtttgcggctctcaccaaacacaccgtgcgccag
cgcatcctcaccgaacaggtgcgcattgacggtcgcgggctcaccgatattcgccagctg
accgccgaagttgaggtgctgccgcgcgtgcacggttcggcaattttcgagcgcggcgaa
acccagattatgggcgtgaccaccttgaatatgctcaagctggagcagcagctcgattca
ctgcacccggtcaagtccaagcggtacattcaccactacaacttcccgccgtactccact
ggtgagaccggccgtgttggttcgcccaagcgccgcgaaatcggccatggtgcgctcgca
gaacgcgcactgaccccggtgctgccctcgcgtgaggaattcccctacgcgatccgccag
gtctctgaggccttgggctcgaacggctccacgtcgatggggtcggtctgcgcttcaacc
ctgtcgctgctcaatgccggtgtgcccctgcgcgcacctgttgcgggtatcgcaatgggc
cttgtctctgacgaggttgatggcgaaacccgttacgccgcgctgaccgatattctgggt
gctgaagatgccctgggcgatatggacttcaaggtcgccggtaccagcgagttcgtgacc
gctattcagctggacaccaagcttgatggtattcctgcatcggtgttggcaggtgcactg
acccaggcacgcgaggctcgcctgcatatcctggaggtgctcaccgcagctattgatgca
cccgatgagatgagtgagttcgcgccgcgcatcatttcggtgaaggttccggtcgctaag
attggtgaggtgatcggcccgaagggtaagaccattaaccagattcaggaagataccggt
gccgatatttccattgaggacgacggtactgtgtttattggcgcgaccgatgggccctct
gctgaggctgcccgcacggcgattaacgccatcgcgaacccgcaggttcccgagatgggt
gagcgctacctgggcaccgtggtgaagctgactgattttggtgcgttcatctctctcacc
cccggcaaggacgggctgatgcacatttctgagatgcgtaagctcaacggcggtaagcgc
gtggtagacaccgaggatgtgctgtcggtggggcagaaggtgcaggttgagatcactaag
attgacgaccgcggcaagctttcgctctccccagtggttgatgacgcccagtag
DBGET
integrated database retrieval system
