Rhodococcus antarcticus: RHODO2019_00245
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Entry
RHODO2019_00245 CDS
T09186
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
rant
Rhodococcus antarcticus
Pathway
rant00362
Benzoate degradation
rant01100
Metabolic pathways
rant01120
Microbial metabolism in diverse environments
rant01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rant00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RHODO2019_00245 (pcaB)
Enzymes [BR:
rant01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
RHODO2019_00245 (pcaB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
Motif
Other DBs
NCBI-ProteinID:
UZJ24988
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All DBs
Position
complement(52388..53506)
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AA seq
372 aa
AA seq
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MSLFDPLFGSDRVAAELSDEAWVRTLIEVEVALARAAAGCGLVSAGAAAQVTGVAAELVV
DVEALGVAAVEGGNPVIPLVRLLRAAAGDAGPAVHVGATSQDVLDTALVLLVRRAAAVLR
EDLAGAADAAALHARVHRDTPMAARTLGQQALPTTFGLVAAGWCAGLDHARAALSVVVDG
LPVQLGGAAGTLAALYPHGLDVGRVLAAELGLPWAPPWHTERTRVGALAGALGVAAGACA
KPATDIVLLAGTELGEVSEAVPGDSSSMPHKHNPIAAVTARAAARRAPGLVATLLASMEH
EHQRAVGAWHAEWPTVTELLRVTGGAASRLRTSLEGLQVHPGSMATHVPAGELVHHAGEL
VDHVLDTRQETA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttcgacccgctgttcggcagcgaccgggtggccgccgagctgtccgacgag
gcctgggtccgcacgctcatcgaggtcgaggtggccctggcccgggcggcggcgggctgt
gggctggtcagcgcgggggcagcggcgcaggtcaccggggtggccgccgagctggtggtg
gacgtcgaggcgctcggggtcgcggccgtggagggcggcaacccggtcatcccgctggtc
cggctgctgcgcgcggccgcgggcgacgcagggccggccgtgcacgtgggggccaccagc
caggacgtgctggacaccgccctggtgctgctggtgcgccgggccgccgcggtgctccgc
gaggacctcgccggcgccgcggacgccgctgctctgcacgcacgggtgcaccgtgacacc
ccgatggccgcccgcaccctgggccagcaggccctgcccacgacgttcgggctggtcgct
gccggctggtgcgccgggctggaccacgcccgggccgcgctgtccgtcgtcgtcgacggg
ttgcccgtgcagctcggcggggcggccggcacgctcgccgcgctgtacccccacgggctc
gacgtcggccgtgtcctggccgccgagctcgggctgccgtgggcgccgccctggcacacc
gagcgcacccgcgtcggggcgctggccggggcgctgggggtcgcggccggggcgtgcgcg
aagcccgcgaccgacatcgtcctgctggccggcaccgagctgggcgaggtgtccgaggcc
gtccccggggactccagctccatgccgcacaagcacaacccgatcgccgccgtcaccgcc
cgcgccgccgcccgccgcgcccccggcctggtcgcgaccctgctggcctcgatggagcac
gagcaccagcgcgccgtcggggcctggcacgcggagtggcccaccgtgaccgagctgctg
cgggtcaccggcggtgccgcgtcccggctgcgcaccagcctcgaggggctgcaggtgcac
cccgggtccatggccacccacgtcccggccggcgagctcgtccaccacgcgggcgagctc
gtcgaccacgtcctcgacaccaggcaggagaccgcatga
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