Rhodococcus antarcticus: RHODO2019_00670
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Entry
RHODO2019_00670 CDS
T09186
Symbol
ligD
Name
(GenBank) non-homologous end-joining DNA ligase
Organism
rant
Rhodococcus antarcticus
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
UZJ25061
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Position
145474..146547
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AA seq
357 aa
AA seq
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MAKDEHGAAETFEVGGVEVRLSSPDKIVFPELGAAGGTKRHVFDHYRAVAEDGAILTALR
DRPTYLQRFPDGITGEEVYQKRVPAKHPEHLRTVRVTFPSGRSADALCPQQAADVLWAAQ
MGTVTFHPWHARAQDVDHPDELRIDLDPQPGTAFDEARDIALQVVRPLLDELGLVGFPKT
SGGRGVHVYVRIEPRWTFTEVRRAAIAFAREVERGAAGRVTTAWWKEQRGEQIFVDYNQN
ARDRTIASAYSVRKTPRATVSTPVTWDELVDVNPDDCTIATVAGLLAERGDPMAGIDARA
FTLDSLLDLAERDEGGGLGDLPYPPNYPKMPGEPKRVQPSRDTDRPDTDGERAPADG
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggacgagcacggcgcggcggagacgttcgaggtcggcggggtcgaggtgcgg
ctgagctcgcccgacaagatcgtgttcccggagctgggggccgccggcggcaccaagcgg
cacgtattcgaccactaccgagccgtcgctgaggacggtgcgatcctcaccgcgctgcgc
gaccggccgacctacctgcagcgcttccccgacgggatcaccggcgaggaggtctaccag
aagcgggtgcccgccaagcaccccgagcacctgcggaccgtgcgggtcaccttcccctcc
gggcgctcggcggacgcgctgtgcccgcagcaggccgccgacgtcctgtgggccgcgcag
atgggcaccgtcaccttccacccctggcacgcccgcgcccaggacgtcgaccaccccgac
gagctgcgcatcgatctcgacccccagccgggcacagcgttcgacgaggcccgcgacatc
gcgctgcaggtggtgcgcccgctgctcgacgagctggggctggtgggcttccccaagacc
tccggtggacgcggggtgcacgtctacgtgcggatcgagccccgctggacgttcaccgag
gtgcgccgggccgccatcgccttcgcccgcgaggtggagcgcggggccgccggccgggtg
accacggcgtggtggaaggagcagcgtggtgagcagatcttcgtggactacaaccagaac
gcccgcgaccgcaccatcgcgagcgcgtactccgtgcgcaagaccccgcgggccacggtg
agcacgccggtgacctgggacgagctggtcgacgtgaaccccgacgactgcaccatcgcg
acggtggccggcctgctcgccgagcgcggcgacccgatggccggcatcgacgcccgcgcg
ttcaccctggactcgctgctggacctggccgagcgcgacgagggcggcgggctgggcgac
ctgccgtacccgccgaactacccgaagatgccgggcgagcccaagcgggtgcagccgagc
cgagacaccgaccgccctgataccgacggcgagagggctcccgccgacggctga
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