KEGG   Rhodovastum atsumiense: RHOA_0619
Entry
RHOA_0619         CDS       T08162                                 
Name
(GenBank) Ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rap  Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:rap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rap03400]
    RHOA_0619
Enzymes [BR:rap01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RHOA_0619
    5.6.2.6  RNA 3'-5' helicase
     RHOA_0619
DNA repair and recombination proteins [BR:rap03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    RHOA_0619
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: CAH2599201
LinkDB
Position
RHOA:675756..678257
AA seq 833 aa
MAGTLPEPFAAWFARQGWTPRPHQCEVLAAAQSGRDVLLIAPTGGGKTLAGFLPGLVALH
AAPRPGLHTLYVSPLKALATDIARNLTRPIEEMDLPVSIGTRSGDTPAGRRRQQREHPPN
LLLTTPESLALLLSLPDAPAQFAGLATIVIDEIHALAGSKRGDQLALGLARLGTLAPAAT
RIGLSATVAHRAALAAYVARDGNSAGVEVIAVTGGAPPRIGMILPRDHLPWSGHMGLAAA
PEILARIRAAGMTIVFVNTRAQAELLFQELWKRNDETLPIAIHHGSLEPEQRQRVEQAMA
AGRLRAVVATSSLDLGIDWGGIDQVLQVGAPKGVSRLLQRVGRANHRMDEPSSALLVPAN
RFEVLECEAAILGVAAQELDGEPPRPGGLDVLAQHVLGTACAGPFLPDALYAEIRRAAPY
AALPRRDFDDVLGFVENGGYTLAAYDQYRRLFRDAEGRVHVTSERVARQHRMNIGTIVEE
PLLQVRYAGRGGAALGEVEEYFANMLTPGDTFIFAGRLLRFLRLRETICEVIDGGSGDPR
VPAYAGGRMPLTTNLADRVRALLQDPSGWAAFPAPVREWLALQKARSRLPGRDDLLVETF
PRGDRWYLVAYCFEGRNAHQTLGMLLTRRMQRFGFAPLGFVATDYVLACWSAHEPHDIAR
LFEEDLLGDDLEAWMAESSMLRRTFRTVAVIAGLIERHHPGAGKNRRQVTVNSDLIYDVL
RRHQPDHILLRATRADAAGGLTDIARIALLLRRVRGRIRHMVLSRVSPLAVPVLLEIGRE
NVRDDDADDALLEEAELVAEATGLAEPPPFRPRPARPRAGPARGDPRQGHLFG
NT seq 2502 nt   +upstreamnt  +downstreamnt
atggctggaacattgccagaaccctttgccgcctggttcgcccgccagggatggacgcca
cgcccgcatcaatgcgaggtgctcgccgccgcccagtccgggcgtgacgtcctgctgatc
gcccccacggggggcggcaagacgctcgccggcttcctgcccggcctcgtcgcgctgcac
gccgccccgcgcccggggctgcacacgctttacgtgtcgccgctcaaggcgcttgccacc
gacatcgcccgcaacctgacgcgcccgatcgaggagatggacctgccggtcagcatcggc
acgcgcagcggcgacacccccgccgggcgccgccgccagcagcgcgagcacccgcccaac
ctgctgctgaccacccccgagagcctcgccttgctgctctcgctgcccgacgcccccgcg
cagttcgccggcctggccacgatcgtcatcgatgagatccatgcgctcgccggcagcaag
cgaggcgaccagctggcgctgggcctggcgcgactcggcacgctcgcccccgccgccacc
cgcatcgggctgtcggccaccgtggcgcaccgggccgcgctggcggcctatgtcgcgcgc
gacggaaacagtgccggcgtggaggtgatcgccgtcaccggcggcgccccgccccggatc
ggcatgatcctgccgcgggaccacctgccctggtcgggccatatgggcctcgccgccgcc
cccgagatcctggcgcgcatccgcgccgccgggatgaccatcgtcttcgtcaacacccgc
gcccaggccgaattgctgttccaggaactgtggaagcgtaacgacgagaccctgcccatc
gccatccaccacggcagcctggagccggagcagcgccagcgcgtcgaacaggcaatggcg
gccggccggctgcgcgcggtggtcgccacctcctcgctcgacctcggcatcgactggggc
ggcatcgaccaggtgctgcaggtcggcgcccccaagggcgtgtcccggctgctgcagcgc
gtcggccgtgccaaccaccgcatggacgagccctcctccgccctgctggtgccggccaat
cgtttcgaggtgctggaatgcgaggccgccatcctcggcgtggcggcgcaggagctggac
ggtgagccgccgcgtccgggcgggctggatgtgctggcgcagcatgtgctgggcaccgcc
tgcgccggcccgttcctgccggatgcgctgtacgccgagatccgccgcgccgccccctac
gccgcgctgccccggcgtgacttcgacgacgtgctcggcttcgttgagaacggtggctac
accctcgccgcctatgaccagtaccggcgcctgtttcgcgacgccgaggggcgcgtgcac
gtcacctcggagcgcgtcgcccgccagcaccgcatgaacatcggcaccatcgtcgaggag
ccgctgctgcaggtgcgctacgccgggcggggcggcgccgcgctcggcgaggtcgaggaa
tatttcgccaacatgctgacccccggcgacaccttcatcttcgctggccggctgctgcgc
ttcctgcgcctgcgcgagaccatctgcgaggtgatcgacggcggctccggtgatcccagg
gtccccgcctatgccggcgggcgcatgccgctgacgaccaacctcgccgaccgcgtgcgc
gcgctgctgcaggacccgtccggctgggccgcctttcccgcgccggtgcgcgaatggctg
gcgctgcagaaggcccgctcccgcctgcccggccgcgacgacctgctggtcgagaccttt
ccccgcggcgaccgctggtacctggtcgcctattgcttcgagggccgcaacgcgcatcag
acgctcggcatgctgctgacgcgccgcatgcagcgattcggcttcgccccgctcggcttc
gtcgccacagattacgtgctggcctgctggtccgcccacgaaccccacgacatcgcccgg
ctgttcgaggaagatttgctcggcgacgacctggaagcctggatggccgaaagctccatg
ctgcgccggaccttccgcactgtcgccgtgatcgccggcctgatcgagcgccaccatccc
ggtgccggcaagaaccgccgccaggtgacggtgaactccgacctgatctacgacgtgctg
cgtcgccatcagcccgaccacatcctgctgcgcgccacccgcgccgacgcggcgggggga
ctgaccgatatcgcccgcatcgccctgctgctgcggcgcgtgcgcggacgcatccgccac
atggtgctctcgcgcgtctcgccgctcgccgtgccggtgctgctggaaatcgggcgggag
aacgtgcgcgacgacgacgcggacgatgccctgctggaagaggccgaactcgtcgccgag
gccaccggcctggctgaaccaccaccgttccggccacgcccggccaggccgcgggcaggc
ccggcccggggggatccgcggcaaggccatctgtttgggtga

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