Rhodovastum atsumiense: RHOA_1258
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Entry
RHOA_1258 CDS
T08162
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
rap
Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:
rap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rap03009
]
RHOA_1258
Enzymes [BR:
rap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
RHOA_1258
Ribosome biogenesis [BR:
rap03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RHOA_1258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
Ubie_methyltran
Methyltransf_25
Methyltr_RsmF_N
MTS
Methyltransf_24
FtsJ
PCMT
Methyltransf_15
Methyltransf_12
GCD14
Motif
Other DBs
NCBI-ProteinID:
CAH2599863
LinkDB
All DBs
Position
RHOA:1336549..1337844
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AA seq
431 aa
AA seq
DB search
MTPAARIAAAIDLVAEIEAAPRKPADAVANDFFRSRRYIGSSDRRTISDRAWRVLRARRR
LEWWLRRAGARPAPRLLVAASLLLEGWTFSGVTQSFSGGQFAPSPLIAAESAVLHPLEGH
TLDHPEMPEAVRLEVPDWILPHLRQRFGHDLAAELAAMAGEAPLDLRVNLLKGTRDAARQ
ALAAEGIEAEPTPLSPWGLRIAGRRPVSTGPAFQGGLVEIQDEGSQLVAAMVGAAPGMRV
VDWCAGAGGKTLALAMSMDNRGHVTACDVSAHRLEGAVRRLRRAGVHNVERHLVEPGDKW
AKRRAGSIDRVLVDAPCTGTGTWRRNPDARLRLQENDLAELRPKQAAILATAAGLVRKGG
RLVYATCSVLPEENEEQLRAFLSAHSDFTLVPLADAWALPGPPPGPGPYLALTPRSHGTD
GFFAAVLERTA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcccgcagcccgtatcgccgccgccatcgacctggtggccgaaatcgaggcggcg
ccgcgcaagccggccgatgccgtcgccaacgatttcttccgcagccgccgctatatcggc
agcagcgaccgccgcaccatctcagaccgcgcctggcgcgtgctgcgcgcacgcaggcgc
ctggaatggtggctgcgccgcgccggggcgagaccggcgccgcgactgctggtggcggcc
tcgctgctgctggaaggctggaccttcagcggcgtgacccagagcttctcgggcggacag
ttcgccccctccccgctcatcgccgccgagagcgcggtgctgcacccgttggaaggccac
accctcgaccatccggagatgccggaggcggtgcggctggaagtgccggactggatcctg
ccccatctgcggcaacgcttcggccacgaccttgccgccgaactggcggcgatggcgggc
gaggcccccctcgacctgcgcgtcaacctgctcaagggcacgcgggacgcggcacggcag
gcgctggccgccgaaggcatcgaggcggagccgacccccctttcgccctggggactgcgc
atcgccggacggcggccggtctccaccggaccggcgttccagggggggctggtcgagatc
caggacgagggcagccagttggtggcggcgatggtcggcgccgccccgggcatgcgggtg
gtcgactggtgcgcgggcgccggcggcaagaccctggcgctggcgatgagcatggacaac
cgcggccacgtcacggcctgcgacgtctcggcgcaccgactcgaaggggcggtgcggcgg
ctgcgccgggcgggcgtgcacaacgtggaacgccacctcgtcgaaccgggcgacaaatgg
gccaagcgccgcgccggcagcatcgatcgcgtcctggtggacgcgccctgcaccggcacg
ggcacatggcgccgcaatccggatgcgcggttgcgattgcaggaaaacgatctcgcggaa
ttgcgcccgaaacaggccgccatcctggcaacggcggccggtctggttcgcaagggcggc
cggctggtctacgctacctgctcggtgttgcccgaggagaacgaggaacagttgcgcgca
ttcctgtccgctcattccgacttcaccctcgttccactggccgacgcctgggcgctgccc
ggaccgccgccggggccaggtccttatctggcgctgacgccacgcagccatgggaccgac
gggttcttcgccgccgtgctggagcgaacggcgtga
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