KEGG   Rhodovastum atsumiense: RHOA_4062
Entry
RHOA_4062         CDS       T08162                                 
Symbol
tssC
Name
(GenBank) Type VI secretion system sheath protein TssC1
  KO
K11900  type VI secretion system protein ImpC
Organism
rap  Rhodovastum atsumiense
Brite
KEGG Orthology (KO) [BR:rap00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rap02044]
    RHOA_4062 (tssC)
Secretion system [BR:rap02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RHOA_4062 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: CAH2602716
LinkDB
Position
RHOA:complement(4213569..4215068)
AA seq 499 aa
MMSETQPTPQAGPAPDAPAGGRVLLDQVLSATKQTAPDRAQELVRTLVEQATQGTIVFDR
NLTRTIERAITVIDGMLSAQFNEIIHDPKFLRLEGSWRGLHYLVMNSETGTNLKIRLMNA
SKRELHRDLTRAVEFDQSLLFRKIYENEFGTPGGEPYGALIGDYEWTSHPEDIETLRLIS
NVSAAAFAPFVSAAGAGMMGFESWTELSRPRDLAKIFDSVEYLKWRGFRDSEDSRFVALT
MPRVIARLPYGERTRPIDAFQYEEAPLDPAGAPLPMRHDEYCWMNAAFVMGARLTDAFAR
HGFCTAIRGAEGGGKVDNLPQHIFQSDDGDMDAKCPTEIGITDRREYELSHLGFLPLCHY
KNHDYAVFFGAQTTQKPKEYDRPDATANARISARLPYIMATGRFAHYLKVMARDKIGSFM
EADDCERWLNRWIKTYVNTNEQAGAESKAKFPLREARVEVREIPGRPGAYNAVAFLRPWL
QLEELTTSMRLVARIPERT
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgatgtccgagacccagccaaccccgcaggccggccccgcgccggacgcccccgccggt
ggtcgcgtgctgctggaccaggtgctgtcagcgacgaagcagaccgcgcccgaccgcgcg
caggaactggtgcgcaccctggtcgagcaggccacgcagggcaccatcgtgttcgaccgc
aacctcacccgcaccatcgagcgcgccatcaccgtcatcgacggcatgctgtcggcgcag
ttcaacgagatcatccacgacccgaaatttctccgcctcgaaggcagctggcgggggctg
cactatctggtgatgaactccgagaccggcaccaacctgaagatccggctgatgaacgcc
tccaagcgggagctgcatcgcgacctgacccgcgccgtcgagttcgaccagagcctgctg
tttcgcaagatctacgagaacgagttcggcacccccggcggcgagccttacggcgcgctg
atcggcgactacgaatggaccagccatccggaagacatcgagacgctgcggctgatctcc
aatgtcagcgccgccgccttcgcccccttcgtctccgccgccggggccggcatgatgggc
ttcgagagctggaccgagctgtcgcggccgcgtgacctcgccaagatcttcgattccgtc
gagtacctgaaatggcgcggcttccgcgacagcgaggacagccgcttcgtggcgctgacg
atgccgcgcgtgatcgcccggctgccctatggcgagcggacccggccgatcgatgccttc
cagtacgaggaagcgccgctcgatcccgccggcgcgccgctgccgatgcggcacgacgag
tattgctggatgaacgccgccttcgtcatgggcgcccgcctgaccgatgcctttgccaga
cacggtttctgcaccgcgatccgcggcgccgagggcgggggcaaggtggacaacctgccg
cagcacatcttccagtccgacgacggtgacatggacgccaagtgcccgaccgagatcggc
atcaccgaccggcgcgagtacgaactgtcgcatctcggcttcctgccgctgtgccactac
aagaaccacgactacgcggtgttcttcggcgcccagaccacgcagaagccgaaggagtac
gaccggccggatgcgaccgcgaatgcgcgcatctccgcccgcctgccctacatcatggcg
accggccggttcgcgcattacctgaaggtgatggcgcgcgacaagatcggcagcttcatg
gaggccgatgactgcgagcgctggctcaaccgctggatcaagacctacgtcaacaccaac
gagcaggcgggcgccgaaagcaaggcgaagttcccgctgcgcgaggcccgcgtcgaggtg
cgcgagatcccgggccggcccggcgcctacaacgccgtcgccttcctgcgtccctggctg
caactggaggagctgaccaccagcatgcgtctcgtggcgcgcatccccgagcgcacctga

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