Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_4130
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Entry
Rahaq2_4130 CDS
T01770
Name
(GenBank) Factor for inversion stimulation Fis, transcriptional activator
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
raq03000
]
Rahaq2_4130
03036 Chromosome and associated proteins [BR:
raq03036
]
Rahaq2_4130
03400 DNA repair and recombination proteins [BR:
raq03400
]
Rahaq2_4130
Transcription factors [BR:
raq03000
]
Prokaryotic type
Helix-turn-helix
Other families
Rahaq2_4130
Chromosome and associated proteins [BR:
raq03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Rahaq2_4130
DNA repair and recombination proteins [BR:
raq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Rahaq2_4130
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_8
Phage_NinH
HTH_30
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AEX53898
UniProt:
H2IUB6
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All DBs
Position
4393408..4393704
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AA seq
98 aa
AA seq
DB search
MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKGYFAQLNGQDVNDLYELVLAEVEQ
PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaacgcgtgaattctgacgtactgaccgtttctaccgttaattctcaggat
caggtaacccaaaaacccctgcgtgactcggtaaaacaagcacttaagggctattttgct
caattgaatggtcaggacgtgaatgacctgtatgagttggtattggctgaagttgaacag
ccactgttagacatggtgatgcagtacacccgtggcaaccagactcgtgcggccctgatg
atgggtatcaaccgcggtacgctgcgtaagaaattgaaaaaatacggcatgaactga
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