Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_4808
Help
Entry
Rahaq2_4808 CDS
T01770
Name
(GenBank) DNA-directed RNA polymerase specialized sigma subunit, sigma24
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rahaq2_4808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
raq03021
]
Rahaq2_4808
Transcription machinery [BR:
raq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Rahaq2_4808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_24
HTH_11
HTH_7
HTH_Tnp_4
HTH_28
HTH_31
GerE
Rv2175c_wHTH
TnsD
Motif
Other DBs
NCBI-ProteinID:
AEX54527
UniProt:
H2J1T0
LinkDB
All DBs
Position
pRahaq201:253800..254318
Genome browser
AA seq
172 aa
AA seq
DB search
MSTNAAVSPARAFEALYSSHHRWLKNWLQFKLGSANDADDLAQDTFMRVLTGDSAQEIRE
PKSFLCTIARRVMVDFFRRNALERAYLDMLALMPEEHMPSPEQRQCLLETLQQIDTMLDG
LGEKVRQAFLLSQLEGLTYPVIAERLNVSVSSVKKYMAKATEHCLLFSLEHG
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaacgctgccgtatcgcccgcccgcgcgtttgaagcgctgtacagctcgcac
caccgctggctgaaaaactggctccagttcaaactggggtcggcaaatgacgccgatgat
ctggcgcaggatacctttatgcgcgtcctgaccggtgacagcgcacaggaaattcgcgaa
cccaaatcctttctttgcaccattgcccgacgcgtcatggtggattttttccgccgcaac
gcgctggaacgtgcttatctcgacatgctggcattgatgccggaagagcatatgccgtcg
ccggaacagcggcagtgtctgcttgaaacattgcagcagattgacacgatgcttgacggg
ttgggcgaaaaagtgcgtcaggcttttctgctttcccagcttgaaggactgacgtatccg
gtgatcgctgaacgtctcaacgtttcggtcagctcggtcaagaagtacatggcaaaggcg
actgaacattgtttgttgttcagcctggaacacggctga
DBGET
integrated database retrieval system
