Rousettus aegyptiacus (Egyptian rousette): 107517979
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Entry
107517979 CDS
T06036
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
ray
Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray05016
Huntington disease
ray05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ray00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
107517979 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
107517979 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ray03019
]
107517979 (HTT)
04131 Membrane trafficking [BR:
ray04131
]
107517979 (HTT)
03029 Mitochondrial biogenesis [BR:
ray03029
]
107517979 (HTT)
Messenger RNA biogenesis [BR:
ray03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107517979 (HTT)
Membrane trafficking [BR:
ray04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107517979 (HTT)
Mitochondrial biogenesis [BR:
ray03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
107517979 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
Death_3
Motif
Other DBs
NCBI-GeneID:
107517979
NCBI-ProteinID:
XP_016014684
LinkDB
All DBs
Position
Unknown
AA seq
3125 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQPSPPQPPQPPPPPQAQPLPPQPQPPPPPPPPGPAVAEE
PLHRPKKELSATKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLCSDDAESDV
RMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAELAHLVRPQKCR
PYLVNLLPCLTRTSKRPEESVQETLAAAIPKIMASFGNFANDNEIKVLLKAFVANLKSSS
PTVRRTAAGCAVSVCQHSRRTQYFYSWLLNALAGLLVPVEDEHPTLLILGVLLTLRYLVP
LLQQQVKDTSLKGSFGVTQKEMEVSPSTEQLVQVYELTLRYTQHQDHNVVTGALELLQQL
FRTPPPELLQALTTVGGLAQLPAARDQPGGRGRSGSIVELIAGEGSSCSPVLSRKQKGKV
LFGEAAALEDDSESRSEASSPAFTASAKGEIGGELAASSGVSTPGSASSAADSTGHDIIT
EQPRSQHTLQPDSVDLTGCDLTSTATDGDEEDILSHSSSQVSAVPSDPAMDLNDGTQASS
PISDSSQTTTEGPDSAVTPSDSSEIVLDGADSQYPGMQLGPAQEDGDEEPTGILPGEDAD
AFRNTAIALQQAHLLKSMGHSRQPSDSSVDKFVSRDEAAEPGDQENKPCRIKGDIGQSTD
DDAAPLVHCVRLLSASFLLTGEKNALVPDRDVRVSVKALALSCVGAAVALHPESFFSKLY
KVPLDTTEYPDEQYISDVLNYIAHGDPQVRGATAILCGTLVCSILSRSRFRVGDWMGAVR
TLTGSTFSLADCIPLLQRTLKDESSVTCKLACTAVRHCITSLCNSSYSDLGLQLLTDVLS
LRSSSYWLVRTELLETLAEVDFRLVSFLEAKADHLHRGAHHYTGLLKLQERVLSSVVLHL
LGDEDPRVRHVAAASLVRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLMHETQPPSHF
SVSTITRIYRGYNLLPSITDVTLENNLSRVIAAVSHELITSTTRALTFGCCEALCLLSTA
FPVCIWSLGWHCGVPPLSASDESRKSCTVGMASVILALLSSAWFPLDLSAHQDALILAGN
LLAASAPKSLRSPWTSEEEASPAATKQEEVWPALGDRSLVPMVEQLFSHLLKVVNICAHV
LDDVAPGPAVKAALPSLTNPPSLSPIRRKGKEKEPAEQASAPLSPKKSSEASPASRQSDT
TGPVTANKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSSEKFGGFLRSALDVLA
QILELATLQDIGKCVEEILGYLKSCFNREPMMATVCVQQLLKTLFGTNLASQFDGLSSNP
SKCQGRAQRLGSSSVRPGLYHHCFMAPYTHFTQALADASLRNMVQAEQDHDTSGWFDVLQ
KVSTQLKTNLTSVAKNRADKNAIHSHIRLFEPLVIKALKQYTTTTSVQLQKQVLDLLAQL
VQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQII
GIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSML
LRLIQYHQVLEMFILVLQQCHKENEDKWRRLSRQIADVILPMLAKQQMHIDSHEALGVLN
TLFEILAPSSLRPVDMLLRSMFVTPDTMASVSTVQLWISGILAILRVLISQSTEEIVLSR
VQELSFSPYLLSCPAINKLRDGESGSGPEELSEGRQAKSLPEETFSRFLLQLVGILLEDI
VTKQLRVEVSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAASRLLTADGADGSFYSL
ESLNARVRSMAPTHPALVLLWCQILLLVSHTDYRWWAEVQQTPKRRSLSSRKSLSPPASG
EEEDSAPAPRPGVCNREIVRRGALILFCDYVCQNLHDSEHLTWLVVNHIQDLVALSHEPP
VQDFISAVHRNSAASGLFIQAIQSRCEDLSPPTTLKKTLQCLEGIHLSQSGAVLTLYVDK
LLRTPFRALARMVDTLACRRVEMLLAANLQSSMAQLPVEELNRIQEYLQSSGLAQRHQRL
YSLLDRLRLATAPGSPGPSPPVTSHPLDGDGSLAVETVSPDKDWYVRLVRSQCWTRSDSA
LLEGAELVDRLPPEDMGAFMTNPEFNVSLLAPCLGLGMREISGGQKSPLFEAARVATLDR
VTSVVQQLPAVHQVLQPFLPVEPTTYWSKLSDLFGDAAWYCKLTTLARALAQYLLVFPKL
PGHLRLPPEKERDTVKFVVTTLEALSWRVIHERVPLSLDLQAGLDCCCLALQLPGLWSAL
SSPEMVTHACSLIHCVRFILEAIVVQPGDQLLSPERRTDTPKAAREDGVDSPTQSPEYVT
AACGMVAEMVESLPSVLSLGHRRNSSMPAFLTAALRNIVVSLARLPLVNSYTRVPPLVWK
LGWSPKPGGDFGTVFPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQFEETWATLLGVLVT
QPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQPRSKPLK
ALDTRFGRKLSMIRGIVEQEIQAMVSKRENIATHHLYQAWDPVPSLSPATTGALIDHDKL
LLQINPERELGDMSYKLGQVSIHSVWLGNSITPLREEEWDEEEEEEADVPTPVSPPTSPV
SSRKHRAGVDIHSCSQFLLELYSRWVLPSSSARRTPVILISEVVRSLLVVSDLFTERNQF
EMMYMTLTELRRVHPPEDEILLQYLVPATCKAAAVLGMDKAVAEPVSRLLESTLRSSHLP
SKIGALHGVLYVLECDLLDDTAKQLIPAVSDYLLSNLRGIAHCVNSHSQQHVLVMCATAF
YLIENYPLDAGPEFSAAIVQMCGVMLSGSEESTPSVVYHCVLRGLERLLLSEQLSRLDAE
SLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKVSPGRTSTPSPAAPDSESVIVAMER
VSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVY
KVFQTLHSTGQSSMVRDWVMLSLSNFTQRTPVAMAVWSLSCFFVSASTGPWVSAILPHVI
SRMGKLDQVDVHLFCLVATDFYRHQMEGELDRRAFQSVFEVVAAPGNPYHRLLACLRSVH
KVATC
NT seq
9378 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctggaaaagctgatgaaggccttcgagtctctcaagtcctttcagcagcag
cagcagccgtcgccgcctcagccccctcagccgccgccgccgccgcaggctcagccgctg
ccacctcagcctcagccgccgccgcccccgccgccgcccggcccggccgtggccgaggag
ccgctgcaccgaccaaagaaagaactctcagccaccaagaaagaccgtgtgaatcattgt
ctgaccatatgtgaaaacatagtggctcagtctctcagaaattctccagaatttcagaaa
cttctgggcattgctatggaactttttctgctgtgcagtgatgacgcagagtcggatgtc
aggatggtggctgacgaatgcctcaacaaagtcataaaagctttgatggactctaatctt
ccgaggttacagttagaactctataaggaaattaaaaagaacggtgccccccggagcctg
cgcgccgccctctggaggtttgccgagctggctcacctggtccggcctcagaaatgcagg
ccttacttggtgaaccttttgccttgtctgactcgaaccagcaagagaccggaggagtct
gttcaggagactttggctgcagctatacccaaaattatggcttcttttggcaattttgca
aatgacaatgaaattaaggtcctgttaaaggcgttcgtagccaacctgaagtccagctcc
ccgacggtgcggcggacggcggctggctgcgccgtgagcgtctgccagcactcccgcagg
acgcagtatttctacagctggctcctgaacgcgctcgcaggtttgctggtccctgtggag
gacgaacaccccaccctcctgattcttggggtgctgctcacattgcggtacctcgtgccc
ttgctgcagcagcaggtcaaggacacgagcctgaaaggcagctttggagtgacacagaaa
gaaatggaagtctctccctcgacagagcagctggtgcaggtctacgagctgacgctgcgg
tacacgcagcaccaggaccacaacgtggtgaccggggccttggagctcctgcagcagctc
ttccggacgccacccccggagctcctgcaggcgctgaccacagtcggcggcctggcacag
ctccccgccgccagagaccagcccgggggccgcggccgcagcgggagcatcgtggaactt
atagccggagagggttcttcatgcagccctgtcctttcaagaaaacaaaaagggaaagtg
ctcttcggagaagcagccgccttggaggatgactccgagtcgaggtcggaggccagcagc
ccagccttcacagcctcagccaagggtgagattggtggcgaactggctgcctcctccggg
gtgtccactcctggctctgccagctcagccgccgactccacgggtcacgacatcatcact
gagcagccccggtcacagcacacattgcagccggattcggtggatctgaccggctgtgac
ttgacgagcactgccaccgatggggacgaggaggacatcttgagccacagctccagccag
gtcagtgctgtcccgtccgaccctgccatggacctgaacgatgggacccaggcctcctca
cccatcagcgacagctcccagaccaccaccgaaggaccagattcagctgtgaccccttcg
gacagttctgaaattgtgttagatggcgctgacagccagtatccagggatgcagcttgga
cccgcgcaggaggacggtgacgaggaacccacgggaatccttcccggggaagacgcagac
gctttcagaaacactgccatcgcccttcaacaagcacatctattgaaaagcatgggccac
agcaggcagccctccgatagcagtgtagataaatttgtgtcgagagatgaagccgctgag
ccaggagatcaggaaaacaagccttgccggatcaagggtgacataggacagtcaaccgac
gacgatgctgctccccttgtccattgtgtccgccttttatctgcttcatttttgctaact
ggggaaaaaaatgcgctggttccggacagggacgtgagggtcagcgtgaaggcgctggcg
ctcagctgtgttggagccgcggtggcccttcatcccgagtcgttcttcagcaaactttac
aaagtacctcttgacaccacggaataccctgatgagcagtacatctcggatgtcctgaac
tacatcgctcacggagacccccaggtccgcggggccacggccatcctgtgtgggaccctc
gtctgctccattctcagcaggtctcgcttccgagtgggggactggatgggcgctgtcagg
acgctgacaggaagtacattttccctggcggactgcattcctttgctgcagagaactttg
aaggatgagtcttccgttacttgcaagttagcttgtactgctgtgcggcactgcatcacg
agcctctgcaacagcagctacagcgacctgggcctgcagctgctcaccgacgtgctgagc
ctgcggagcagctcgtactggctggtgaggacggagctgctggagacgctcgcagaggtt
gacttcaggttggtgagcttcttggaggcaaaagcagaccaccttcaccgaggggcacat
cattacacggggctgctgaaactgcaggagcgggtgctcagcagcgtcgtcctccacctg
ctcggggacgaagacccccgcgtgcgccacgtcgcagccgcttcgctcgtgaggcttgtc
ccaaaactcttttacaaatgtgaccaaggtcaagctgatccggtagtggctgtggcaaga
gatcaaagcagcgtttacctgaaactcctcatgcatgagacgcagccgccctcccacttc
tctgtcagcaccataaccagaatatacagaggctataatttactgccgagcataacggat
gtcaccctggaaaataacctctcaagagtcatcgcggcggtgtcccacgagctcatcaca
tcgaccacgcgggcgctcacctttggatgctgtgaagcattgtgtcttctttcaactgcc
tttcctgtttgcatttggagtttaggttggcattgtggagtgcccccgctgagcgcctca
gatgagtccaggaagagctgcactgtgggcatggcctcggtgatcctcgccctactctcg
tcagcgtggttcccgttagacctctcggcccatcaagatgctttgatcttagccggaaac
ttgcttgcagccagtgcccccaagtctctgagaagcccatggacctctgaagaggaggcc
agcccagcagccaccaagcaggaggaggtgtggcccgctctgggtgaccggagcctggtg
cccatggttgagcagctcttctcccacctgctcaaggtggttaacatctgcgcacacgtc
ctggatgacgtggctcccgggccggcagtgaaggcagccctgccatctctaacgaacccg
ccgtctctgagtccgatccgacggaaggggaaggagaaggagccggcagagcaggcctct
gcgccgctgagccccaagaagagcagcgaagccagcccagcctctcgacagtctgacact
acagggccagttacagccaacaaatcctcatctctgggaagtttctaccaccttccttcc
tacctcaaattgcacgatgtcctaaaggccacccacgccaactataaggtcaccttggat
cttcagaacagctctgagaagtttgggggatttctgcgctctgccctggacgttctcgct
cagatcctggagttggccactctgcaggacatcgggaagtgcgttgaggagatcctgggg
tacctgaagtcctgcttcaatcgagaaccgatgatggcaactgtttgtgttcagcagctg
ttgaagactctctttgggacaaacttggcctcccagtttgatggcttatcttctaacccc
agcaagtgccaaggccgcgcacagcgccttggctcctccagcgtgcggccgggcctgtac
caccactgcttcatggctccgtacacccacttcacgcaggccctggcggacgccagcctg
aggaacatggtgcaggcggagcaggaccacgacacctcggggtggtttgacgtactccag
aaggtgtccacccagctgaagacaaacctcacgagcgtcgcgaagaaccgtgcggataag
aatgctattcacagtcacattcgcttgttcgagcctctggtcataaaggcgctgaagcag
tacacgaccacgacttctgtgcagctccagaagcaggttctggatctgctggcacagctg
gttcagctgcgcgttaattactgtcttctggattcagaccaggtgtttattgggtttgtg
ctgaagcagttcgaatacattgaagtgggccagttcagggaatcagaggcaattattcca
aacatctttttcttcctggtattactgtcttatgaacgctatcattcaaaacagatcatc
ggaattcctaaaatcattcaactctgtgatggcatcatggccagtgggaggaaggctgtg
acacatgccattccggctctgcagcccatagtccatgacctttttgtgttaagaggaacc
aataaagccgacgcaggaaaagaactggaaacccagaaggaggtggtggtgtcgatgttg
ctgaggctcatccagtaccatcaggtgctcgagatgttcattctggtcctgcagcagtgc
cacaaggagaacgaagacaagtggaggcggctctcccggcagatagccgacgtcatcctc
ccgatgctggccaagcagcagatgcacatcgattctcacgaagccctcggagtgttgaat
actttgtttgagatcctggccccttcctccctccggcccgtggacatgcttttacggagt
atgttcgtcactccagatacaatggcgtccgtgagcaccgttcagctctggatctcggga
atcctggccattctgagggttctgatttcccagtcgaccgaagagatcgttctttctcgg
gtccaggagctctccttctcgccatacttactctcctgtccagcaattaataagttaaga
gacggggagagtggttcaggcccggaggagctcagcgaaggcaggcaggcgaagagtttg
ccagaggaaactttttcaaggtttctcctgcagctggtcggcattctcttggaggacatt
gtcacaaagcagctgagagtggaagtgagtgagcagcagcacaccttctactgccaggag
ctgggcacgctgctcatgtgcctcatccacatcttcaagtccggaatgttccggagaatc
acagcggccgcctctagactcctcaccgctgacggcgccgacggcagtttctacagcctg
gagagcttgaacgcgcgcgtgcgctccatggcccccacacacccggccctcgtgctgctc
tggtgccagatcctgctgctcgtcagccacaccgactaccgctggtgggccgaggtgcag
cagacccccaaaagacgcagcctgtccagcaggaagtcgctcagcccccctgcgtctgga
gaggaggaggactccgccccagcgcccagacccggagtgtgcaacagagagatcgttcgg
cggggcgccctcatcctcttctgcgattacgtctgtcagaacctgcacgactcggagcac
ctgacgtggctcgtcgtgaaccacattcaggacctggtcgccctgtcgcacgagcctccc
gtgcaggacttcatcagcgccgtccaccgcaactccgccgccagcggcctcttcatccag
gccatccagtctcgctgcgaagacctgtcaccccccaccaccctgaagaaaacgcttcag
tgcctggaagggatccacctcagccagtcgggcgccgtgctaacgctgtacgtggacaag
cttttgcgtactccgttccgcgcgctggctcgcatggttgacacccttgcttgtcgccgg
gtagaaatgcttttggctgcaaatttacagagcagcatggcccagctgcccgtggaagag
ctcaacagaatccaggagtaccttcagagcagcggcctggcccagagacaccagaggctc
tattcgctgctggacaggcttcgtcttgccactgcaccagggtctcctggcccctctcct
ccggtcacgtcccacccactggatggggacggctccttggccgtggagacagtgagtccg
gacaaagactggtacgtccgcctcgtcagatcccagtgctggaccaggtcagactccgcg
ctgctggagggggcggagctggtggatcggctccccccggaggacatgggcgcattcatg
acgaacccggagttcaacgtgagcctgttggccccgtgcctgggtctgggcatgcgggaa
atttccggaggccagaagagtcccctcttcgaagccgctcgtgtggcgactctagaccgt
gtgaccagcgtggttcagcagctgcctgctgtccatcaagtgctccagcccttcctgcct
gtggagcccaccacctactggagcaagttgagcgatctgttcggtgacgctgcgtggtac
tgcaagctgaccacactggcccgggccctggcccagtacctgctggtgttccccaagctg
cccggccacctgcgccttcctcctgagaaggagagggacactgtgaagttcgtggtcacg
accctcgaggcgctgtcgtggcgtgtgatccacgagcgcgtcccgctgagtctggacctc
caggccggcctcgactgctgctgcctggccctgcagctgcccggcctctggagcgcgctg
tcctccccggagatggtgacccacgcctgctccctcatccactgcgtccgcttcatcctg
gaagccatcgtggtgcagcctggggaccagctgctcagtccagaaagacggacagacacc
ccgaaggcggccagagaggacggggtggactcgcccacccaaagtcccgagtatgttaca
gcggcctgtgggatggtggcggagatggtggagtccctgccgtccgtgctgtccttgggc
cacaggaggaacagcagcatgcccgccttcctcacggcggcgctcaggaacatcgtggtc
agcctggcccgcttacccctcgtcaacagctacacgcgggtacccccgctggtctggaag
ctcggatggtcacccaagccaggaggggacttcggcacggtgttccctgagatccccgtg
gagttccttcaggaaaaggaagtcttcaaggagttcatctaccgcatcaacacgctaggg
tggaccagccgtacccagtttgaggaaacgtgggccaccctcctcggtgtcctggtgact
cagcccctcgtgatggagcaggaggagagcccaccggaagaagacacggagaggacccag
atcaatgtcctggctgtgcaggccatcacctcgctggtgctgagtgcgatgaccgtgccc
gtggccggcaacccagccgtgagctgcttggagcagcagccccgaagcaagcctctgaag
gcactcgacaccaggttcggcagaaagttgagcatgatcagaggaatcgtagagcaggaa
attcaagcaatggtttccaagagggagaacatcgccacccatcatttataccaagcgtgg
gaccctgtcccctctctgtctccggctactacaggtgccctcatcgatcacgacaagctc
ctgctgcagatcaaccccgagcgggagctgggcgacatgagctacaagctcggccaggtg
tccatccactcggtgtggctggggaacagcatcacacccctgagagaggaggagtgggac
gaggaggaggaggaggaggccgacgtccccacaccggtgtcaccacccacgtcccccgtc
agctccaggaagcaccgggccggcgttgacatccactcctgttcgcagttcctgcttgag
ctgtacagtcgctgggtcctgccgtcgagctcggctcggaggacccccgtcatcctgatc
agcgaagtggttcggtctcttctcgtggtctcagacttgttcaccgaacgcaaccagttt
gagatgatgtacatgaccctgaccgagctgcggagggtgcaccctccagaggacgagatt
ctccttcagtacctggtgcctgccacctgcaaggcggccgccgtcctcggaatggacaag
gccgtggccgagccggtgagccggctcctggagagcacgctgaggagcagccacctgccc
agcaagattggggccctgcacggcgtcctctacgtgctggagtgcgacctcctggacgac
accgcgaagcagctcatcccggccgtcagcgactacctcctgtccaacctcagaggcatc
gcccactgcgtgaactctcacagccagcagcacgtgctggtgatgtgcgccaccgctttc
tacctgatcgagaactaccctctggacgccgggcccgagttctctgcggcgatagtgcag
atgtgtggggtgatgctgtctgggagcgaggagtccaccccgtccgtcgtttaccactgc
gtcctgaggggcctagagcgcctcctgctctccgagcagctctcccggctggacgcagag
tcgctggtcaagctgagtgtggacagagtgaacgtgcacagcccgcaccgggccatggcg
gccctgggcctgatgctcacctgcatgtacacagggaaggagaaagtcagcccaggcaga
acgtccacccctagccccgccgcccccgacagtgagtccgtgatcgtggccatggagcgc
gtgtccgtcctcttcgacaggatcaggaagggctttccctgcgaagccagagtggtggcg
cgcatcctgccgcagtttctagacgacttcttcccgccccaggacgtcatgaacaaggtc
attggggagttcctgtcgaaccagcagccctacccacagttcatggccaccgtggtgtac
aaggttttccagactctgcacagcacggggcagtcgtccatggtccgggactgggtcatg
ctgtccctgtccaacttcacgcagaggacgccggtcgccatggccgtgtggagcctgtcc
tgcttcttcgtcagcgcgtccacgggcccgtgggtctcggcgatccttccccacgtcatc
agccggatgggcaagctagatcaggtggacgtccacctgttctgcctggtggccacggac
ttctacagacaccagatggaaggcgaactggaccgccgggcctttcagtccgtgttcgag
gtggtcgcggcgccgggcaacccgtatcaccgcctgctagcttgtttgcggagcgtccac
aaggtcgccacgtgctga
DBGET
integrated database retrieval system
