Rhizobium bangladeshense: J2J98_16865
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Entry
J2J98_16865 CDS
T07228
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rban
Rhizobium bangladeshense
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rban03009
]
J2J98_16865
Enzymes [BR:
rban01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
J2J98_16865
Ribosome biogenesis [BR:
rban03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
J2J98_16865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
BON
DUF3658
Motif
Other DBs
NCBI-ProteinID:
QSY87835
LinkDB
All DBs
Position
3468969..3469994
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AA seq
341 aa
AA seq
DB search
MSDPFKQAAGIRKVLTADETAEGRLDAWLTAQVGEDFSRSRIKALIKDGRVSLRGEQVTD
PQRKVRVGDSFEITLPEPEDPTPQGEDIPLDILHEDDDLIVISKPAGLVVHPGPGNWTGT
LVNALIYHCGDTLSGIGGVRRPGIVHRLDKDTTGVMVVAKNDIAHRNLSLQFADHGRTMP
LERAYQAVVWGRPRTLSGTVDAPLGRATGDRTRRAVKRPDSQDADHAITHYQVIERFHEN
PDATALASLVECHLETGRTHQIRVHMAHIGHPLLGDMVYGAGFRTKANLLPEEIRKVVKG
FDRQALHAFMLQFEHPRTGDLMHFEVPMPDDMVELVEALRR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacccctttaaacaagcagccggcattagaaaagtcctgaccgccgatgaaacc
gccgaaggccgactcgacgcctggctgacggcgcaggtcggcgaggatttttcccgcagc
cgcatcaaggcgctgatcaaggacggccgggtttctctgcggggcgagcaggttaccgat
ccgcagcgcaaggtgcgtgtcggcgacagtttcgagatcacactgcccgaaccggaagac
ccgactccgcagggtgaggatatcccgctcgatatcctgcacgaggacgacgacctcatc
gtcatatcgaagccggccgggctggtcgtccatcccggccccggcaactggacaggaacg
ctggtcaacgcgctgatttatcattgcggcgatactctttccggtatcggcggcgtgcgt
cgccccggcatcgtccatcgtctcgacaaggacacgacaggcgtcatggtcgtcgccaaa
aacgacattgcccatcgcaacctctcacttcaatttgccgatcacggccgcaccatgccg
ctggagcgggcttatcaggcagtcgtctgggggcgccctcgcacgctgtcgggcacggtc
gacgcgcctcttggccgcgccaccggcgaccgcacccgccgcgccgtcaagcgccctgac
agtcaggatgctgatcacgcaatcacgcattatcaggtgatcgagcgctttcatgaaaac
cctgatgcgacggcgctcgcgtcgctggtcgagtgccacctcgaaaccggccgcacgcat
cagatccgcgtgcacatggcccatatcggtcacccgctgctcggcgacatggtttacggc
gccggcttcaggaccaaggcaaatctgctgccggaagagatccgaaaggtggtcaagggt
ttcgaccgtcaggcgctgcacgccttcatgctgcaattcgagcatccccgcaccggtgac
ctcatgcatttcgaggtaccgatgcccgacgatatggtggaactggtcgaggcgctgcgg
cgataa
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