Rhinopithecus bieti (black snub-nosed monkey): 108531930
Help
Entry
108531930 CDS
T04641
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04371
Apelin signaling pathway
rbb04613
Neutrophil extracellular trap formation
rbb05034
Alcoholism
rbb05203
Viral carcinogenesis
rbb05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
108531930 (HDAC4)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
108531930 (HDAC4)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
108531930 (HDAC4)
05203 Viral carcinogenesis
108531930 (HDAC4)
09165 Substance dependence
05034 Alcoholism
108531930 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rbb03036
]
108531930 (HDAC4)
Enzymes [BR:
rbb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108531930 (HDAC4)
Chromosome and associated proteins [BR:
rbb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
108531930 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
108531930
NCBI-ProteinID:
XP_017731056
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MSSQSHPDGLSGRDQPVELLNPARVNHMPSTVDVATALPLQVAPSAVPMDLRLDHQFSLP
VAEPALREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLA
MKHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCISSDPRYWYGKTQHSSLDQSSPPQSGVSTSYNHPVLGMYDAKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACSSAPGSGP
SSPNNSSGSVSAENGIAPAVPSIPAETSLAHRLVTREGSAAPLPLYTSPSLPNITLGLPA
TGPAAGTAGQRDAERLALPTLQQRLSLFPGTHLTPYLSTSPLERDGGAAHSPLLQHMVLL
EQPPAQAPLVTDWYLSGLGALPLHAQSLVGADRVSPSIHKLRQHRPLGRTQSAPLPQNAQ
ALQHLVIQQQHQQFLEKHKQQFQQQQLHMNKIIPKPSEPARQPESHPEETEEELREHQAL
LDEPYLDRLPAQKEAHAPAGVQVKQEPIESDDEEAEPPREVDPGQRQPSEQELLFRQQAL
LLEQQRIHQLRNYQASMEAAGIPVSFGSHRPLSRAQSSPASATFPVSVQEPPTKPRFTTG
LVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVH
SEAHTLLYGTNPLNRQKLDSKKLLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAARLAV
GCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKIL
IVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFT
GGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGY
LTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVR
SMEKVMEIHSKYWRCLQRATSTAGRSLIEAQTCENEEAETVTAMASLSVGVKPAEKRPDE
EPMEEEPPL
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccatccagatggactttctggccgagaccagccagtggagctgctg
aatcctgcccgcgtgaaccacatgcccagcacagtggatgtggccacggcgctgcctcta
caagtggccccctcggcagtgcccatggacctgcgcctggaccaccagttctcgctgcct
gtagcagagcccgccctgcgggagcagcagctacagcaggagctcctggcgctcaagcag
aagcagcagatccagaggcagatcctcatcgccgagttccagaggcagcacgagcagctc
tcccggcagcacgaggcgcagctccacgagcacatcaagcagcagcaggagatgctggcc
atgaagcaccagcaggagctgctagaacaccagcggaagctggagaggcaccgccaggag
caggagctggagaagcagcaccgggagcagaagctgcagcagctcaagaacaaggaaaag
ggcaaagagagtgccgtggccagcacagaagtgaagatgaagttacaagaatttgtcctc
aataaaaagaaggcgctggcccatcggaatctgaaccactgcatttccagcgacccccgc
tactggtacgggaaaacgcagcacagttcccttgaccagagttctccaccccagagcgga
gtgtcaacctcctataaccacccagtcctgggaatgtacgacgccaaagatgacttccct
cttaggaaaacagcttctgaaccgaatctgaaattacggtccaggctaaagcagaaagtg
gccgaaagacggagcagccctctgctacgcaggaaagacgggccagtggtcactgctcta
aaaaagcgtccattggatgtcacagactccgcgtgcagcagcgccccaggctccggaccc
agctcacccaacaacagctccgggagcgtcagcgcagagaacggcatcgcgcccgccgtc
cccagcatcccggcggagacgagtttggcacacagacttgtgacgcgagaaggctcggcc
gctccacttcccctctacacgtcgccgtccctgcccaacatcacgctgggcctgcctgcc
accggccctgctgctggcacggcgggccagcgggatgccgagagactcgcccttcccacc
ctccagcagcggctctcccttttccctggcacccacctcactccctacctgagcacctcg
cccttggagcgggacggaggggcagcgcacagccctcttctgcagcacatggtcttactg
gagcagccgccggcacaagcgccgctcgtcacagactggtatctttcaggcctgggagca
ctgcccctccacgcacagtccttggttggtgcggaccgggtgtccccttccatccacaag
ctgcggcagcaccgcccgctggggcgaacccagtcggccccgctgccccagaatgcccag
gctctgcagcacctagtcatccagcagcagcatcagcagtttctggagaaacacaagcag
cagttccagcagcagcaactgcacatgaacaagatcatcccgaaaccaagcgagccggcc
cggcagccagagagtcacccagaggagacggaggaggagctccgtgagcaccaggctctg
ctggacgagccctacctggaccggctgccggcgcagaaggaggcgcacgcaccggctggc
gtgcaggtgaagcaggagcccattgagagcgatgacgaagaggcggagcccccgcgggag
gtggacccaggccagcgccagcccagtgagcaggagctgctcttcagacagcaagccctc
ctgctggagcagcagcggatccaccagctgaggaactaccaggcgtccatggaggctgcc
ggcatccccgtgtccttcggcagccacaggcctctgtcccgggcgcagtcctcaccggca
tctgccacctttcccgtgtctgtgcaggagccccccaccaagccaaggttcacgacaggc
ctcgtgtatgacacgctgatgctgaagcaccagtgcacctgcgggagcagcagcagccac
cccgagcacgccgggaggatccagagcatctggtcccgcctgcaggagacaggcctccgg
ggcaaatgcgagtgcatccgcggacgcaaggccaccctggaggagctgcagacggtgcac
tcggaagcccacaccctcctgtacggcacaaaccccctcaaccggcagaaactggacagt
aagaaacttctaggctcgctcgcctccgtgttcgtccgactcccctgcggtggtgttggg
gtggacagcgacaccatctggaacgaggtgcactcagcgggggcggcccgcctggccgtg
ggctgtgtggtggagctggtcttcaaggtggccacgggggagctgaagaatggctttgct
gtggtccgaccccctggacaccacgcggaggagagcacacccatgggcttttgctacttt
aactccgtggccgtggcagccaagcttctgcagcagaggttgagcgtgagcaagatcctc
atcgtggactgggacgtgcaccatggaaacgggacccagcaggctttctacagcgacccc
agcgtcctgtacgtgtccctccaccgctacgatgatgggaacttcttcccgggcagcggg
gctcctgacgaggtgggcacagggcccggcgtgggtttcaatgtcaacatggctttcacc
ggcggcctggaccctcccatgggagacgctgagtacttggcagccttcagaacggtggtc
atgccgatcgccagcgagtttgccccggacgtggtgttggtgtcatcgggcttcgacgcc
gtggagggccaccccacacctctcgggggctacaacctctctgccagatgctttgggtac
ctgacgaagcagctgatgggcctggctggcggccggattgtcctggccctcgagggaggc
cacgacctgaccgccatttgcgacgcctccgaagcatgtgtttctgccttgctgggaaat
gagcttgatcctctcccagaaaaggttttacagcaaagacccaatgcaaacgctgtccgc
tccatggagaaagtcatggaaatccacagcaagtactggcgctgcctgcagcgtgcaacc
tccacggcagggcgttctctgatcgaggctcagacttgcgagaacgaagaagccgagacg
gtcaccgccatggcctcgctgtccgtgggcgtgaagcccgccgaaaagagaccagacgag
gagcccatggaagaggagccgcccctgtag
Rhinopithecus bieti (black snub-nosed monkey): 108532177
Help
Entry
108532177 CDS
T04641
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
rbb
Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb04371
Apelin signaling pathway
rbb04613
Neutrophil extracellular trap formation
rbb05034
Alcoholism
rbb05203
Viral carcinogenesis
rbb05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
rbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
108532177 (HDAC5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
108532177 (HDAC5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
108532177 (HDAC5)
05203 Viral carcinogenesis
108532177 (HDAC5)
09165 Substance dependence
05034 Alcoholism
108532177 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rbb03036
]
108532177 (HDAC5)
Enzymes [BR:
rbb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108532177 (HDAC5)
Chromosome and associated proteins [BR:
rbb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
108532177 (HDAC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
108532177
NCBI-ProteinID:
XP_017731504
UniProt:
A0A2K6L3G3
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MNSPNESADGMSGREPSLEILPRTSLHSIPVTVEVKPVLPRAMPSSMGGGGGGSPSPVEL
RGALVGSVDPTLREQQLQQELLALKQQQQLQKQLLFAEFQKQHDHLTRQHEVQLQKHLKQ
QQEMLAAKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNKEKSKESAIA
STEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSGPPGTPPSYK
LPLPGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVE
ITGAGPGASSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQHRALPLDSSPN
QFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQGGTLTGKFMS
TSSIPGCLLGVALEGDGSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERVAT
SMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQLQLGKILTKTG
ELPRQPTTHPEETEEELTEQQEALLGEGALTMPREGSTESESTQEDLEEEDEEEDGEEEE
DCIQVKDEEGESGAEEGPDSEEPGAGYKKLFSDAQPLQPLQVYQAPLSLATVPHQALGRT
QSSPAAPGGMKSPPDQPVKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQ
ETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDNKKLLGPISQKMYAVL
PCGGIGVDSDTVWNEMHSSSAVRMAVGCLLELAFKVAAGELKNGFAIIRPPGHHAEESTA
MGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGN
FFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLV
SAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACV
SALLSVELQPLDEAVLQQKPNVNAVATLEKVIEIQSKHWSCVQKFAAGLGRSLREAQAGE
TEEAETVSAMALLSVGAEQAQAAAAREHSPRPAEEPMEQEPAL
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgaactctcccaacgagtcggcagatgggatgtcaggccgggaaccatccttggaaatc
ctgccgcggacttctctgcacagcatccctgtgacagtggaggtgaagccggtgctgcca
agagccatgcccagttccatggggggtgggggtggaggcagccccagccctgtggagcta
cggggtgctctggtgggctctgtggatcccacactgcgggagcagcaactgcagcaggag
ctcctggcgctcaagcagcagcagcagctgcagaagcagctcctgttcgctgagttccag
aaacagcatgaccacctgacaaggcagcatgaggtccagctacagaagcacctcaagcag
cagcaggagatgctggcagccaagcagcagcaagagatgctggcagccaagcggcagcag
gagttggagcagcagcggcagcgggagcagcagcggcaggaagagctggagaagcagcgg
ctggagcagcagctgctcatcctgcggaacaaggagaagagcaaagagagtgccattgcc
agcaccgaggtaaagctgaggctccaggaattcctcttgtcgaagtcaaaggagcccaca
ccaggcggcctcaaccattccctcccacagcaccccaaatgctggggagcccaccatgct
tctttggaccagagttcccctccccagagcggcccccctgggacgcctccctcctacaaa
ctgcctttgcctgggccctacgacagtcgagatgacttccccctccgcaaaacagcctct
gaacccaacttgaaagtgcgttcaaggctaaaacagaaggtggccgagcggagaagcagt
cccctcctgcgtcgcaaggatgggactgttattagcacctttaagaaaagagctgttgag
atcacaggtgccgggcctggggcgtcgtccgtgtgtaacagcgcacccggctccggcccc
agctctcccaacagctcccacagcaccatcgctgagaatggctttactggctcagtcccc
aacatccccactgagatgctcccccagcaccgagccctccctctggacagctcccccaac
cagttcagcctctacacgtctccttctctgcccaacatctccttagggctgcaggccacg
gtcactgtcaccaactcacacctcactgcctccccgaagctgtcgacacagcaggaggcc
gagaggcaggccctccagtccctgcggcagggtggcacgctgacgggcaagttcatgagc
acatcctctatccctggctgcctgctgggcgtggcactggagggcgacgggagcccccat
gggcatgcctccctgctgcagcatgtgctgttgctggagcaggcccggcagcagagcacc
ctcattgctgtgccactgcacgggcagtccccactagtgacgggtgaacgtgtggccacc
agcatgcggacggtgggcaagcttccgcggcatcggcccctgagccgcactcagtcctca
ccgctgccgcagagtccccaggccctgcagcagctggtcatgcaacaacagcaccagcag
ttcctggagaagcagaagcagcagcagctacagctgggcaagatcctcaccaagacaggg
gagctgcccaggcagcccaccacccaccctgaggagacagaggaggagctgacagagcag
caggaggccttgctgggggagggagccctgaccatgccccgggagggctccacagagagt
gagagcacacaggaagacctggaggaggaggacgaggaggaggatggggaggaggaggag
gattgcatccaggtcaaggacgaggagggcgagagtggtgctgaggaggggcccgactcg
gaggagcctggtgctggttacaaaaaactgttctcagatgctcagcctctgcagccgctg
caggtgtaccaggcacccctcagcctggccactgtgccccaccaggccctgggccgcacc
cagtcctcccctgctgcccctgggggcatgaagagccccccagaccagcccgtcaaacac
ctcttcaccacaggtgtggtctacgacacgttcatgctgaagcaccagtgcatgtgtggg
aacacacacgtgcaccctgagcatgctggccggatccagagcatctggtcccggctgcag
gagacaggcctgcttagcaagtgcgagcgaatccggggtcgcaaagccacgctagatgag
atccagacagtgcactctgaataccacaccctgctgtatgggaccagccccctcaaccgg
cagaagctggacaacaagaagctgcttggccccatcagccagaagatgtatgctgtgctg
ccttgtgggggaatcggggtggacagtgacaccgtctggaatgagatgcactcctccagt
gctgtgcgcatggcggtgggctgcctgctggagctggccttcaaggtagctgcaggagag
ctcaagaatggatttgccatcatccggccgccaggacaccatgccgaggaatccacagcc
atgggattctgcttcttcaactctgtagccatcactgcaaaactcctacagcagaagttg
aacgtgggcaaggtcctcatcgtggactgggacattcaccatggcaatggcacccagcag
gcgttctacaacgacccctctgtgctctacatctccctgcatcgctatgacaacgggaac
ttttttccaggctctggggctcctgaagaggttggtggaggaccaggcgtggggtacaat
gtgaacgtggcatggacaggaggtgtggacccccccattggagacgtggagtaccttaca
gccttcaggacagtggtgatgcccattgcccacgagttctcacctgacgtggtcctagtc
tctgctgggtttgatgctgttgaaggacatctgtctcctctgggtggctactctgtcacc
gccagatgttttggccacttgaccaggcagctgatgaccctggcagggggccgggtggtg
ctggccctggagggaggccatgacttgaccgccatctgtgatgcctctgaggcttgtgtt
tcggctctgctcagtgtagagctgcagcccttggacgaggcagtcttgcagcaaaagccc
aacgtcaacgcagtggccacgctagagaaagtcatcgagatccagagcaaacactggagc
tgtgtgcagaagtttgccgctggtctgggccgttccctgcgggaggcccaggcaggtgag
accgaggaggccgagactgtgagcgccatggccttgctgtcggtgggggctgagcaggcc
caggctgcagcagcccgggaacacagccccaggccggcagaggagcccatggagcaggag
cctgccctgtga
DBGET
integrated database retrieval system
