Rhodocyclaceae bacterium Thauera-like: B4966_00015
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Entry
B4966_00015 CDS
T05394
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rbh
Rhodocyclaceae bacterium Thauera-like
Brite
KEGG Orthology (KO) [BR:
rbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbh03032
]
B4966_00015
03400 DNA repair and recombination proteins [BR:
rbh03400
]
B4966_00015
Enzymes [BR:
rbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B4966_00015
DNA replication proteins [BR:
rbh03032
]
Prokaryotic type
DNA Topoisomerases
B4966_00015
DNA repair and recombination proteins [BR:
rbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B4966_00015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AUL98732
UniProt:
A0A2K9L6K9
LinkDB
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Position
2703..5195
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AA seq
830 aa
AA seq
DB search
MSEQHNTPTTSANVYDESSIQQLEGLEAVRKRPGMYIGDTSDGTGLHHMVFEVVDNAIDE
ALAGHCDEIVVTIHADNSISVADNGRGIPVGIKMDDKHEPKRSAAEIVMCVLHAGGKFNQ
NSYKVSGGLHGVGVSCVNALSKWLRLTIRRDGKKHFMEFRRGVPVDRVIEVVDGVQVSPL
RVTGETTKRGTELHFLADEEIFGTVEFHYEILAKRLRELSFLNNGVKIRLIDQRTGKEED
FAFAGGVRGFVEFINRTKTVLHPTVFYAEGSTRIPTGAGHEAELTVEVAMQWNDSYQEQV
LCFTNNIPQSDGGTHLTGLRAAMTRVINKYIEENEIAKKAKVDITGDDMREGLACVLSVK
MPDPKFASQTKMKLVSSEARPAVEEVVAGKLTDFLLENPIDAKTICNKIVEAARARDAAR
KAREMTRRKGVLDGIGLPGKLADCQEKDPALCELYLVEGDSAGGSAKQGRDRKFQAILPL
KGKILNVEKARFDKLLQSQEIATLITALGTGIGKDDYKPEKLRYHRIIIMTDADVDGAHI
RTLLLTFFYRQMPELVERGHIYIAQPPLYKIKHGKTELYIKDDHELNNHLLKLALDGAAL
LPREGAQPIADEALGGLARSYLLAEAVTRRLSGLIDPEVLQVMLAHNIEVSLADQAAAQA
SAARIRTHLPDGIGIRAEFHDETEAWRLVIERLHHGNLKFSAIEEDFLVSSDYRSIRNAS
EAIAGLIGPGAEIRRGDKRQPVTRFADAIGWLLNEVERGLTKQRYKGLGEMNPEQLWETT
MDPAVRRLLRVQIDDAIAADEIFTTLMGDDVEPRRAFIENNALYAQNIDV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacagcacaacacgcccacgacctctgccaacgtctatgacgagtccagcatt
cagcaactcgaagggctcgaagccgtacgcaagcgcccgggtatgtacattggtgacacc
tcggacggcaccggtttgcatcacatggtgttcgaagtggtcgacaacgccattgacgaa
gccttggccggccactgcgatgaaatcgtggtcaccattcacgccgacaactccatctcg
gtggccgacaacggccgcggcattccggtcggcatcaaaatggacgacaagcacgagccc
aagcgctcggcagcggaaatcgtcatgtgcgtgctgcatgccggtggcaaattcaaccag
aacagttacaaagtctcaggcggtctgcacggtgtgggcgtgtcctgcgtcaacgcccta
tccaagtggctgcgcctgaccatccgtcgcgatggcaaaaaacatttcatggaattccgt
cgtggggtgccggtcgatcgcgtcatcgaagtggtcgacggcgtacaagtctcccctttg
cgcgtcaccggtgagaccaccaagcgcggcaccgaactgcattttcttgccgatgaggaa
atctttggcaccgtcgaatttcactacgaaatcctcgccaagcgcctgcgcgaactttcc
tttctcaacaacggcgtcaaaatccgcctgatcgatcagcgcaccggcaaggaagaagat
tttgcctttgccggtggcgtgcgcggcttcgtggaattcatcaaccgcaccaaaaccgtg
ctccacccgacggtgttttacgccgaaggcagcacccgcattcccaccggcgcaggtcac
gaggccgaactgacggtcgaagtggccatgcaatggaacgacagctaccaggaacaggtg
ctgtgctttaccaacaacatccctcagtctgacggcggcacccacctcaccggtctgcgc
gccgccatgacccgggtaatcaacaaatacattgaagagaacgagatcgccaaaaaggcc
aaggtcgacatcaccggcgacgatatgcgcgaaggtctggcctgcgtgctctcggtgaag
atgcccgaccccaaattcgccagccagaccaagatgaagctggtgtcttccgaagcgcgc
ccggcagtcgaagaagtggtggccggcaaattgaccgactttctgctggaaaacccgatc
gacgccaaaaccatttgcaacaagatcgtcgaagccgcgcgtgcccgcgatgccgcccgc
aaggcgcgcgagatgacccgccgtaaaggcgtgctcgacgggattggtctgcccggcaaa
cttgccgactgtcaggaaaaagaccctgcgctgtgcgaactctacctggtggaaggcgac
tcggccggcggctcggccaagcagggccgcgaccgcaaatttcaagcgatcctgccgctc
aagggcaagattctcaacgttgaaaaagcccgcttcgacaagctcttgcaaagccaggag
atcgccacgctgatcaccgcgctcggcaccggcatcggcaaagacgattacaagcccgaa
aagctgcgttaccaccgcatcatcatcatgaccgacgccgacgtggatggcgcgcatatc
cgcaccctgctcttgacctttttctaccgccagatgcccgaactggtcgagcgcggtcac
atctacatcgcccagccgccgctctacaagatcaagcacggcaaaaccgagctctacatc
aaagacgaccacgagctcaacaaccacctgctcaagcttgccctcgacggcgccgcgctg
ctgccgcgcgaaggcgcacaaccgatcgccgatgaagccctgggcggcttggcgcgcagc
tatctgctcgccgaagcggtcacccggcggctttccggcttgatcgacccggaagtgctg
caggtcatgctggcgcacaacatcgaagtcagcctggctgaccaagctgccgcacaagcc
tccgccgcccgaatccgcacccatctgcccgatggcatcggcatccgcgccgagttccat
gatgaaaccgaagcctggcgcctggtcatcgaacgcctgcaccacggtaacctcaagttc
agcgcgattgaggaagacttcctggtctccagtgactaccgcagcatccgcaacgcctcg
gaggccattgccggcctgatcggccccggcgccgaaatccgccgcggcgataagcgccag
ccggtcacccgcttcgccgatgccatcggctggctgctcaatgaagtcgagcgcggcttg
accaaacagcgctataagggtctgggcgaaatgaacccagagcagctgtgggagaccacc
atggacccggcggtacgtcgcctgttgcgtgttcagatcgatgacgccatcgccgccgac
gagatcttcaccacactcatgggcgacgatgtcgagccgcgtcgcgccttcatcgaaaac
aacgccctgtacgcgcaaaacatcgacgtctga
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