Rhodopseudomonas boonkerdii: E0H22_03105
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Entry
E0H22_03105 CDS
T07799
Name
(GenBank) cisplatin damage response ATP-dependent DNA ligase
Organism
rbk
Rhodopseudomonas boonkerdii
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GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
EthD
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
UGV24759
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Position
674704..676440
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AA seq
578 aa
AA seq
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MNRFAELLDRLAYEPGRNNKLRLLVGYFREVPDPDRGYALAALTGALSFKHAKPGLIRDL
IASRADPVLFELSYDYVGDLSETVALMWPKGESGAWSSPLPNPPPNGGRVGERGSPTRET
IDALHNNPPPPTLTEVVTTLRALGKSELPTQLMRWLDELDETGRWALLKLVTGALRIGIS
ARLAKTAAAMLGDKDPHEVELIWPGLVPPYGELFAWLEGRAEKPVNRDPAPFRPVMLAHA
VEDGDLASLDAADFTAEWKWDGIRVQATSGLGDDGRLVTRMYSRSGEDITASFPDLVPSL
RLPGAIDGELLVLRDKRVQSFNVLQQRLNRKSVTPKLMKDYPIHLRAYDLLSDGESDLRE
LPFEERRKKLEAFVAKLDDDRIDLSGQIVFADWDALTAARADPAIAGAGADAEAVEGVML
KRRDSVYLPGRPKGQWWKWKRDPHIIDAVLMYAQRGHGKRSSYYSDYTFGVWTDGEEGDR
LVPVGKAYFGFTDEELLQIDRFVRRHTTEKFGPVRHVTHEPDKGLVLEVAFEGLARSSRH
KSGVAMRFPRISRLRWDKPPREADRLETLERMLKVDVE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcttcgccgagttgctcgatcgcttagcttacgagcccggccgcaacaacaag
ctgcgactgctggtgggttattttcgcgaagtgcccgatcccgaccgtggttacgcgctg
gcggctttgacgggggcgctgtcgttcaaacatgcaaaaccgggattgatccgcgatctc
atcgcatcgcgcgccgatccggtgctgttcgagctgtcttacgattatgtcggcgatctc
tcggagacggttgcgttgatgtggccgaagggagagagcggagcttggagttcccctctc
cccaaccctccccccaacggggggagggttggggagagggggagccccacgcgcgaaacc
atcgacgcactccacaacaacccgccgccacccacgctcaccgaagtcgtcaccacgctt
cgcgccctcggcaaatccgaactccccacccagctcatgcgctggctcgatgaactcgac
gagaccgggcgctgggctctgctgaagctggtcaccggcgcgttgcgcatcggcatttcg
gcgcggctcgccaagaccgcggccgcgatgctcggcgacaaggatccccatgaggtcgaa
ctgatctggcccggcctcgtgccgccctatggcgaattgttcgcctggctcgaaggacgg
gccgagaagccggtcaatcgcgatcccgcgccgttccggccggtgatgttggcgcatgcg
gtcgaggatggggatctcgcctcgctcgatgccgccgattttacggccgaatggaaatgg
gatggcatacgcgtgcaggcgacctcgggccttggggatgacggtagactcgtcacgcga
atgtattcgcgtagcggtgaggatatcaccgcgagctttcccgatcttgtgccttcgcta
cgtctgcccggcgccatcgatggcgagctgctggtgctgcgggacaagcgcgtgcagtcg
ttcaacgtgttgcagcagcgcctcaaccgcaagagcgtcacgccgaaactgatgaaggac
tatccgatccatctgcgcgcctatgacctgctcagcgatggcgaaagcgacctgcgcgag
ctgccgttcgaggagcgacgcaaaaagcttgaggcgttcgtcgcgaagctggatgatgat
cgcatcgacctgtccgggcagatcgtgttcgccgattgggatgcgctcaccgcagcccgc
gccgatcctgccattgcaggcgccggcgccgatgcggaagctgtcgagggcgtgatgttg
aaacgtcgcgacagcgtctatctgcccggccggccgaagggccagtggtggaagtggaag
cgcgatccgcacatcatcgatgccgtgctgatgtatgcgcagcgtggccacggcaagcgc
tcgtcctattattccgactatacgtttggggtctggaccgatggcgaggagggcgaccgg
ctggtgccggtgggcaaggcgtatttcggtttcacggatgaggagcttttgcagatcgat
cgcttcgtgcgccgtcataccaccgagaaattcggtccggtccgccatgtcactcatgaa
ccggacaaagggctggtgctggaagtcgctttcgaggggttggcgcggtcgtcgcggcac
aagtctggcgttgcgatgcgttttccgcgcatcagtcgcctgcgctgggacaagccaccg
cgcgaggcggatcggctggagacgctggagcggatgttgaaggtggacgtcgaataa
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