Rhodopseudomonas boonkerdii: E0H22_08050
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Entry
E0H22_08050 CDS
T07799
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
E0H22_08050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbk03400
]
E0H22_08050
DNA repair and recombination proteins [BR:
rbk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
E0H22_08050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
UGV25642
LinkDB
All DBs
Position
complement(1730014..1730898)
Genome browser
AA seq
294 aa
AA seq
DB search
MAPPRAYWKGSLKLSLVTCPVVLYPASTTVEKTRFHMINRETGNRLKQQMIDSETGDVVE
KDQKARGYEISKGEYIEIEKEELEAVQIESNHTIDIDSFVPRDEIDRRYLNHPYYIAPDG
KAGADAFAVIRDAMKDQDRVALARIVLTNREHVIALEPLGKGLLGTTLRYPYEVRDETDY
FDDIKSPKIAKDMIELATHILDSKASHFDPGKFKDEYEAALKTLVKRKAAGKPVKAVAKE
EKPDNVINLMDALKASLKGGKTPTKRAVAARRPTARKRPGKKVRHSAARHRKAS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggctccgccccgcgcctattggaaaggctctctcaaactgtcgctggtgacctgcccg
gtcgtactctatccggcctccaccaccgtggagaaaacccgattccatatgatcaatcgc
gaaaccggcaatcgtctgaaacagcagatgatcgactccgagaccggcgacgtggtcgag
aaggatcagaaagcgcgcggctacgagatcagcaaaggcgagtatatcgagatcgagaag
gaagaactcgaagccgtacagatcgaaagcaatcacaccatcgacatcgacagctttgtc
ccgcgcgacgagatcgaccgccgctacctgaaccatccctactacatcgcgccggacggc
aaggccggggccgatgcctttgcggtgattcgcgatgcgatgaaggatcaggatcgcgtg
gccctggcgcgcatcgtgctgaccaatcgcgagcatgtgatcgccctcgagccgctcggc
aagggcctgctcggcaccacgttgcgttatccttacgaggtgcgtgacgagaccgactat
ttcgacgacatcaagagtccgaagatcgccaaggacatgatcgagctcgcgacacatatc
ctcgacagcaaggcatcgcatttcgatcccggcaaattcaaggacgaatacgaagcggca
ctaaagacactggtgaaacgcaaggcagccggcaaaccggtgaaggccgtggcgaaggaa
gagaagcctgataacgtgatcaatctgatggacgcactgaaggccagcctcaaaggcggc
aaaacaccgaccaagcgcgccgtcgccgcgcgccggccaacggcgcgcaagcggcccggc
aagaaggtcaggcattctgcagcgcgtcatcgcaaggccagctga
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