Rhodopseudomonas boonkerdii: E0H22_19220
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Entry
E0H22_19220 CDS
T07799
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rbk
Rhodopseudomonas boonkerdii
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbk03021
]
E0H22_19220 (rpoH)
Transcription machinery [BR:
rbk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E0H22_19220 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_11
KORA
HTH_23
HTH_7
HTH_Crp_2
GntR
HTH_20
HTH_28
HTH_3
Motif
Other DBs
NCBI-ProteinID:
UGV27621
LinkDB
All DBs
Position
4210162..4211061
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AA seq
299 aa
AA seq
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MARTATLPVLNGESGLSRYLAEIRKFPMLEPQEEYMYAKRWREHEDRDAAHHLVTSHLRL
VAKIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPEKGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKKLFFNLRKAKSKISALDEGDLRPDQVKVIATRLGVTEQDVIDMNRRL
GGDASLNAPIRDDGEAGEWQDWLVDNSPNQEAIMAEHEELDHRRQALTGAIQVLNPRERR
IFEARRLADEPMTLEDLASEFGVSRERVRQIEVRAFEKVQSAVKGTIAKQEAAALEAAH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcacagctacactgccggttctcaacggagaatcgggtctgtctcgttacctc
gccgagatccgcaagttcccgatgctggaaccgcaagaggaatacatgtacgccaagcgt
tggcgtgaacatgaggatcgcgacgcggcacatcatctcgtgaccagccatcttcggctc
gttgccaagatcgccatgggctatcgcggctacggcctgccgatttccgaggttgtctcc
gaaggcaacgtcggcctgatgcaggcggtgaaacgcttcgagcccgaaaagggcttccgt
ctggccacctacgccatgtggtggatcaaggcgtcgattcaagagtacatcctgcgctcg
tggtcgctcgtgaaaatgggcacgaccgcgaaccagaagaagctgttcttcaacctgcgt
aaggcgaagagcaagatttccgccctggacgaaggcgatctccgcccagaccaggtcaag
gttatcgccacgcgtctcggcgtgacggaacaggacgtcatcgacatgaaccgccgcctt
ggcggcgacgcgtcgctcaacgctccgatccgtgacgacggcgaagccggcgaatggcag
gactggctggtcgacaactcgcccaaccaggaagccatcatggcggagcacgaggagctc
gatcatcgccgtcaggcgctgaccggcgcgatccaggtgctcaacccgcgcgaacggcgc
atcttcgaggcgcgtcgcctcgcggacgagccgatgacgctggaagatcttgcttcggag
ttcggcgtctcgcgcgagcgtgttcgtcagatcgaggtccgcgccttcgagaaggtgcag
agcgcggtcaagggcacgatcgccaagcaggaagcggccgccctggaagccgcgcactga
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