KEGG   Rhodopseudomonas boonkerdii: E0H22_24565
Entry
E0H22_24565       CDS       T07799                                 
Name
(GenBank) conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
rbk  Rhodopseudomonas boonkerdii
Pathway
rbk02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rbk00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    E0H22_24565
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rbk02044]
    E0H22_24565
Secretion system [BR:rbk02044]
 Type IV secretion system
  Trb secretion system protein
   E0H22_24565
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: UGV28549
LinkDB
Position
5390623..5391312
AA seq 229 aa
MSIFKRPAVHYGKTPQPETPYQRAAQVWDERIGSARVQARNWRTMAFGSLLLTAGFASAL
VWQTARGTVVPWVVQVDKLGQAQTVAPATADYRPTDPQVAWHLARFIEQVRSIPADPIIV
RQNWLRAYEWTTDQGAAALNDYARANDPFAKVGKQQVSVDVSSVIRASPDSFRVAWTEQH
YEDGKLASTERWTAILTIVIQPPRDADRLKANPLGIYVNAISWSKEMAQ
NT seq 690 nt   +upstreamnt  +downstreamnt
atgagcatcttcaaacgacccgccgtgcattacggcaagaccccacaacccgaaacgcca
tatcagcgcgccgcgcaggtttgggacgagcggataggttctgctcgcgtccaggcgcgc
aactggcgcactatggcgttcggcagcctgctcctgacggcgggcttcgcttccgccctt
gtctggcagaccgcacgcgggactgtcgtgccctgggtggttcaagtggacaagctcggc
caggcgcaaaccgtcgcgccggccaccgccgactatcggccgacagacccgcaagtggcg
tggcatctggcgcgcttcatcgagcaggtcaggagcatcccggccgatcccatcattgtc
cggcagaactggcttcgcgcctacgaatggacgaccgaccagggcgcggcggcgctcaac
gattatgcgcgcgccaacgacccgttcgcaaaagtcggcaagcaacaggtgtccgtcgat
gtgtcgagcgtcatccgtgcctcgcccgacagcttccgcgtcgcctggaccgagcagcac
tatgaagacggcaagctcgcctcgacggagcggtggaccgcgatcctgaccatcgtgatc
cagccgccgcgcgacgccgaccgactgaaagccaacccgctcggcatctacgtcaacgca
atttcgtggtcgaaggaaatggcgcaatga

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