Rhodobiaceae bacterium SMS8: RHODOSMS8_01452
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Entry
RHODOSMS8_01452 CDS
T05596
Symbol
apxIB
Name
(GenBank) toxin RTX-I translocation ATP-binding protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs02010
ABC transporters
rbs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHODOSMS8_01452 (apxIB)
03070 Bacterial secretion system
RHODOSMS8_01452 (apxIB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbs02000
]
RHODOSMS8_01452 (apxIB)
02044 Secretion system [BR:
rbs02044
]
RHODOSMS8_01452 (apxIB)
Transporters [BR:
rbs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RHODOSMS8_01452 (apxIB)
Secretion system [BR:
rbs02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RHODOSMS8_01452 (apxIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_22
AAA_29
MeaB
AAA_16
ABC_ATPase
AAA_21
AAA_18
Rad17
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AWZ00988
UniProt:
A0A2Z4UIW3
LinkDB
All DBs
Position
complement(1434987..1437110)
Genome browser
AA seq
707 aa
AA seq
DB search
MDSGLGCIALLTQYYRLPFEPSQVTHELGLTDGVLGTDDLLRVAKHIGFQTRKSASTFER
LERVSLPAIAVRDDGSFIVLARASEDRVLVQDPAAQAPQELTREEFESNWSGDLVLLTTR
AGLAGDQRKFDVSWFVPAIVKYRKLFSEVLIASFFLQIFALVTPLFFQLVIDRVLVHRGL
TTLDVLVFGLIAISVFEVILGALRTYTFSHTTSRVDVVLGASLFKHLMALPVSYFEARQT
GQTVARVRELETIRSFLTGSALTLVIDIFFTIVFFAVMWLYSPTLTLVVLGSIPFYVILS
ILVTPMLRARVEERFQRGAENQTFLVESVVGVQTLKAMAVEPQMQRRWEDQLAGYVTASF
KAANLGNVAGQVAQFINKIVIALTLWIGARLVIEGGITVGQLVAFNMLAGRVSGPILRLA
QLWQDFQQARISVDRLGDILNQPTETMGGAARSNLPALDGRISFDHVTFRYRPGGAEVLK
DVSLDIQPGEVLGIVGPSGSGKSTLTKLAQRLYVPESGRVLVDGVDIAMIDPSWLRRQIG
VVLQENMLFNRTVRENIALANPSMSMDRVVTAAKMSGAHDFILELANGYDTILEERGGNL
SGGQRQRIAIARALVTNPKILIFDEATSALDYESEYLIQKNMAAISQGRTVMIIAHRLAA
VRNADRIITVEEGRITESGTHEELLSLGGRYASLYRHQTGALDLPAE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtggatagtggactagggtgcattgcgctgttgacgcagtattaccggctgccttttgag
ccttcacaggtaacccatgaattggggctgactgatggggttttgggcaccgatgatctg
ttgcgcgtggctaaacatattggctttcagacgcgtaaatccgcctcaacgtttgagcgt
ttggagagggtctctctaccggcaatagcagtccgggatgacggttccttcatcgttttg
gcgcgcgcgtcggaggaccgagttctcgtacaggatccagcagctcaggcgccccaggag
ttgacccgagaagagtttgaaagcaactggtctggcgacctggtgttgctgacgacacgt
gctgggctggcgggcgaccaacggaagttcgacgttagttggtttgttccggcgattgtc
aaataccgaaaactgttcagcgaagtgctgatcgcttccttttttctacaaatctttgcg
cttgtaaccccactcttctttcaactagtgatcgacagagtgttggtacatcgaggtttg
accacacttgatgtattggtcttcggtctcattgcgatttctgtttttgaggtcatcctt
ggagcgcttcggacctacacatttagtcatacaacaagtcgggttgatgttgttcttggg
gccagcctctttaagcatctgatggcgttgccggtcagctatttcgaagcccggcaaacg
ggacagaccgttgcccgtgtgcgcgagttagaaaccatccgatcgtttctgacaggatct
gcgcttacccttgtcatcgacattttcttcactatcgtattcttcgctgtcatgtggctt
tacagtccaaccctcacactcgtcgtgttggggtccattccattctatgtgatcctgtct
atccttgtgacgccgatgctgcgggcgcgagtggaggaacgtttccagcgcggtgcggaa
aatcagacctttcttgttgaatccgtcgttggggtgcaaacccttaaggcgatggcggtt
gaaccgcagatgcagcggcgctgggaagaccagcttgcagggtatgtgaccgcgagtttt
aaggcggctaatcttggcaatgttgcgggacaggtggcgcagttcatcaataaaattgtc
atcgcccttacgctttggatcggcgctcggctggtgattgaaggcggcatcacagttggt
cagctggttgccttcaacatgcttgcggggcgggtgagtgggccgattttgcgtctggcc
cagctgtggcaggatttccaacaggcccgcatttctgttgaccgactaggtgacattctg
aaccagccaaccgaaaccatggggggagccgctcgctccaacctgccagccctcgatggt
cgcatttcttttgaccatgtgacattccgatatcggccgggtggcgcggaagtcctgaaa
gacgtttctcttgatattcagccaggtgaggtgcttggcattgtcggcccgtcgggttcg
ggcaaaagcaccctcaccaaactggcgcagcggctttatgtacccgaaagcgggcgggtg
cttgtggatggtgttgatattgcgatgatagaccctagctggctgcgtcgtcagattggt
gttgtgctgcaagaaaacatgcttttcaaccggactgtgcgagagaatattgcgctggca
aacccttccatgtcgatggaccgtgttgttacagctgccaagatgtctggcgcgcatgat
ttcattcttgaattggcaaacggatacgacacgatccttgaggagcgtggtggaaacctc
tccggtgggcagcgccaacgcattgcaattgctcgtgctcttgtcaccaatccgaagatt
cttattttcgatgaagcgaccagcgcgctcgattatgaatccgagtatctcattcaaaag
aatatggcggcgatctcacaagggcgcactgtgatgattattgcgcatcgattggccgcg
gtacgcaatgcagaccgcattatcaccgttgaagaagggcgcatcaccgaaagcggcacc
catgaggagttgctgagtttgggtggacgctatgcaagcctctatcggcaccaaacgggt
gctcttgacctgccggcggagtga
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