Rhodobiaceae bacterium SMS8: RHODOSMS8_02170
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Entry
RHODOSMS8_02170 CDS
T05596
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rbs
Rhodobiaceae bacterium SMS8
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbs03021
]
RHODOSMS8_02170 (rpoH)
Transcription machinery [BR:
rbs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RHODOSMS8_02170 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
LysM
HTH_11
GalP_UDP_tr_C
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AWZ01699
UniProt:
A0A2Z4ULA3
LinkDB
All DBs
Position
2182178..2183110
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AA seq
310 aa
AA seq
DB search
MATTPTSTTSRMPAVTPEQSLSRYLQEIRKFPMLEPQEEYMLAKRFKEHEDPDAAEKMVT
SHLRLVAKIAMGYRGYGLPTGEVISEGNVGLMQAVKRFEPEKGFRLATYAMWWIRAAIQE
YILRSWSLVKMGTTAAQKKLFFNLRKVKGQLQAFEEGDLKPENLTTIATRLGVTEKEVTD
MNRRMSGPDNSLNAPIRNAEADGGEWQDWLVDESTDQEVELGEKEELNVRRDMLHAAMQS
LNEREMHILTERRLKDNPSTLEDLSQEYGISRERVRQIEVRAFEKLQKAMRDAVSEQAAE
RRAARDDMLN
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcgactacaccaacaagcaccacgtcacgcatgccggcggttacgccggagcaatca
ctgtcgcgctacctgcaggaaatccgcaaatttccaatgctggaaccgcaggaagaatac
atgctggccaagcgcttcaaggaacacgaagaccccgacgctgctgaaaagatggtgacc
agccatctgcgtcttgtggcaaaaatcgccatgggctatcgcggctatggcctgcccacc
ggcgaagtgatctccgaaggcaatgtgggcctgatgcaagccgtgaaacgctttgagcct
gagaaaggcttccgcctcgcaacctatgccatgtggtggatccgggcagctattcaggaa
tacatcctgcgctcctggtcgctcgtaaaaatgggcacgaccgctgcacagaaaaaactc
ttcttcaatctccgcaaggtgaagggccagctgcaggcctttgaagaaggtgatctgaag
ccggaaaatctcaccacgatcgcaacacgcttaggcgtgaccgagaaagaagtgacggat
atgaaccgtcgcatgtccggcccggacaattctctcaatgcaccgatccgcaatgcagaa
gctgacggcggtgaatggcaggattggctggtcgatgaaagcaccgaccaggaagtcgag
ctcggtgaaaaagaagagctcaatgtccgccgcgacatgctgcacgcagcgatgcagtcg
ctcaacgaacgtgaaatgcacatcctcaccgaacgtcgcttgaaggataacccctcaacg
cttgaggacctgagccaagaatatggcatcagccgcgaacgcgtccgccagattgaagtg
cgcgcttttgagaaactgcagaaagccatgcgtgatgcggtgagcgaacaggcggccgag
cgccgggcagcccgcgacgacatgctgaattga
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