Rhodobiaceae bacterium SMS8: RHODOSMS8_03581
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Entry
RHODOSMS8_03581 CDS
T05596
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rbs03016
]
RHODOSMS8_03581 (truA)
Enzymes [BR:
rbs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RHODOSMS8_03581 (truA)
Transfer RNA biogenesis [BR:
rbs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RHODOSMS8_03581 (truA)
Prokaryotic type
RHODOSMS8_03581 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AWZ03082
UniProt:
A0A2Z4UQC7
LinkDB
All DBs
Position
3633587..3634327
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AA seq
246 aa
AA seq
DB search
MSRYKLTIEYDGGPYNGWQSQTNGRAVQDQVTKAVRAYSGEGAEVFAAGRTDTGVHALGQ
VVHLDLERGDKADKVKDAINFHLKPAPISVVASELVSDEFHARFDATKRHYLYRIINRRA
PLTLDLGQAWAVPVPLDADAMHRAAQALIGKHDFTTFRSVHCQAKSAVRTMDEITVSRYG
EEIEVICRARSFLHNQVRSIVGSLKCVGEGKWRPKEMEAALKAADRSRCGPVAPPDGLYL
TAVDYD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacaaactcaccattgaatatgatggcggtccctataatggctggcagtcg
caaacgaatgggcgcgctgttcaggatcaggtgacgaaagccgttcgcgcttacagtggc
gaaggggcagaggtctttgccgcggggcggacggacaccggtgtccatgcactcggtcag
gtggttcatctggatctggaacggggcgacaaggccgacaaggtgaaggatgcgatcaat
tttcatttaaagcccgcgccgatctctgttgttgcctcagaactcgtcagcgacgaattt
cacgcgcgctttgatgctacaaagcgccactatctttaccgcatcatcaatcgccgcgcg
ccactcacgcttgatctcgggcaggcttgggctgtgccggtgcctcttgatgcggacgcc
atgcatagggcggcgcaggcactgattggcaagcatgacttcacgaccttccggtccgtt
cattgccaggcgaagtccgcggtgcgaacaatggatgagatcactgtctcccgctatggc
gaagagattgaggtgatctgtcgggcacgctctttcctgcacaatcaggtgcgttccatt
gtgggctcgctcaaatgtgtcggcgaaggcaaatggcgcccaaaagagatggaagcggcg
ttgaaggctgcagaccgttcccgctgtggaccggtcgcacccccagatggtctctatctg
acagcagtcgactacgactga
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integrated database retrieval system
